SMTL ID : 3tnw.2 (1 other biounit)

Structure of CDK2/cyclin A in complex with CAN508

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x F18: 4-[(E)-(3,5-DIAMINO-1H-PYRAZOL-4-YL)DIAZENYL]PHENOL(Non-covalent)

F18.1: 11 residues within 4Å: Chain A: I.12, A.33, K.35, E.53, V.66, F.82, E.83, F.84, L.85, L.136, D.147 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.82, A:F.82 Hydrogen bonds: A:E.53, A:E.83, A:L.85, A:L.85, A:D.147

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 3 residues within 4Å: Chain B: M.30, Q.33, I.36 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:M.30 NA.3: 3 residues within 4Å: Chain B: L.44, W.47, Q.84 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baumli, S. et al., The CDK9 C-helix Exhibits Conformational Plasticity That May Explain the Selectivity of CAN508. Acs Chem.Biol. (2012)

Release Date

2012-02-15

Peptides

Cyclin-dependent kinase 2: A
Cyclin-A2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Cyclin-dependent kinase 2

Cyclin-A2

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