- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-24-mer
- Ligands
- 144 x CD: CADMIUM ION(Non-covalent)
- 24 x PFL: 2,6-BIS(1-METHYLETHYL)PHENOL(Non-covalent)
PFL.7: 14 residues within 4Å:- Chain A: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Chain V: L.24, S.27, Y.28, R.59, E.63, L.81
- Ligands: PFL.175
8 PLIP interactions:3 interactions with chain V, 5 interactions with chain A- Hydrophobic interactions: V:Y.28, V:R.59, V:L.81, A:L.24, A:Y.28, A:L.31, A:R.59, A:L.81
PFL.15: 14 residues within 4Å:- Chain B: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Chain W: L.24, S.27, Y.28, R.59, E.63, L.81
- Ligands: PFL.183
8 PLIP interactions:3 interactions with chain W, 5 interactions with chain B- Hydrophobic interactions: W:Y.28, W:R.59, W:L.81, B:L.24, B:Y.28, B:L.31, B:R.59, B:L.81
PFL.23: 14 residues within 4Å:- Chain C: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Chain X: L.24, S.27, Y.28, R.59, E.63, L.81
- Ligands: PFL.191
8 PLIP interactions:5 interactions with chain C, 3 interactions with chain X- Hydrophobic interactions: C:L.24, C:Y.28, C:L.31, C:R.59, C:L.81, X:Y.28, X:R.59, X:L.81
PFL.31: 14 residues within 4Å:- Chain D: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Chain U: L.24, S.27, Y.28, R.59, E.63, L.81
- Ligands: PFL.167
8 PLIP interactions:3 interactions with chain U, 5 interactions with chain D- Hydrophobic interactions: U:Y.28, U:R.59, U:L.81, D:L.24, D:Y.28, D:L.31, D:R.59, D:L.81
PFL.39: 14 residues within 4Å:- Chain E: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Chain Q: L.24, S.27, Y.28, R.59, E.63, L.81
- Ligands: PFL.135
8 PLIP interactions:5 interactions with chain E, 3 interactions with chain Q- Hydrophobic interactions: E:L.24, E:Y.28, E:L.31, E:R.59, E:L.81, Q:Y.28, Q:R.59, Q:L.81
PFL.47: 14 residues within 4Å:- Chain F: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Chain T: L.24, S.27, Y.28, R.59, E.63, L.81
- Ligands: PFL.159
8 PLIP interactions:5 interactions with chain F, 3 interactions with chain T- Hydrophobic interactions: F:L.24, F:Y.28, F:L.31, F:R.59, F:L.81, T:Y.28, T:R.59, T:L.81
PFL.55: 14 residues within 4Å:- Chain G: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Chain S: L.24, S.27, Y.28, R.59, E.63, L.81
- Ligands: PFL.151
8 PLIP interactions:3 interactions with chain S, 5 interactions with chain G- Hydrophobic interactions: S:Y.28, S:R.59, S:L.81, G:L.24, G:Y.28, G:L.31, G:R.59, G:L.81
PFL.63: 14 residues within 4Å:- Chain H: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Chain R: L.24, S.27, Y.28, R.59, E.63, L.81
- Ligands: PFL.143
8 PLIP interactions:5 interactions with chain H, 3 interactions with chain R- Hydrophobic interactions: H:L.24, H:Y.28, H:L.31, H:R.59, H:L.81, R:Y.28, R:R.59, R:L.81
PFL.71: 14 residues within 4Å:- Chain I: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Chain P: L.24, S.27, Y.28, R.59, E.63, L.81
- Ligands: PFL.127
8 PLIP interactions:3 interactions with chain P, 5 interactions with chain I- Hydrophobic interactions: P:Y.28, P:R.59, P:L.81, I:L.24, I:Y.28, I:L.31, I:R.59, I:L.81
PFL.79: 14 residues within 4Å:- Chain J: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Chain M: L.24, S.27, Y.28, R.59, E.63, L.81
- Ligands: PFL.103
8 PLIP interactions:5 interactions with chain J, 3 interactions with chain M- Hydrophobic interactions: J:L.24, J:Y.28, J:L.31, J:R.59, J:L.81, M:Y.28, M:R.59, M:L.81
PFL.87: 14 residues within 4Å:- Chain K: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Chain N: L.24, S.27, Y.28, R.59, E.63, L.81
- Ligands: PFL.111
8 PLIP interactions:5 interactions with chain K, 3 interactions with chain N- Hydrophobic interactions: K:L.24, K:Y.28, K:L.31, K:R.59, K:L.81, N:Y.28, N:R.59, N:L.81
PFL.95: 14 residues within 4Å:- Chain L: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Chain O: L.24, S.27, Y.28, R.59, E.63, L.81
- Ligands: PFL.119
8 PLIP interactions:5 interactions with chain L, 3 interactions with chain O- Hydrophobic interactions: L:L.24, L:Y.28, L:L.31, L:R.59, L:L.81, O:Y.28, O:R.59, O:L.81
PFL.103: 14 residues within 4Å:- Chain J: L.24, S.27, Y.28, R.59, E.63, L.81
- Chain M: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Ligands: PFL.79
8 PLIP interactions:5 interactions with chain M, 3 interactions with chain J- Hydrophobic interactions: M:L.24, M:Y.28, M:L.31, M:R.59, M:L.81, J:Y.28, J:R.59, J:L.81
PFL.111: 14 residues within 4Å:- Chain K: L.24, S.27, Y.28, R.59, E.63, L.81
- Chain N: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Ligands: PFL.87
8 PLIP interactions:3 interactions with chain K, 5 interactions with chain N- Hydrophobic interactions: K:Y.28, K:R.59, K:L.81, N:L.24, N:Y.28, N:L.31, N:R.59, N:L.81
PFL.119: 14 residues within 4Å:- Chain L: L.24, S.27, Y.28, R.59, E.63, L.81
- Chain O: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Ligands: PFL.95
8 PLIP interactions:5 interactions with chain O, 3 interactions with chain L- Hydrophobic interactions: O:L.24, O:Y.28, O:L.31, O:R.59, O:L.81, L:Y.28, L:R.59, L:L.81
PFL.127: 14 residues within 4Å:- Chain I: L.24, S.27, Y.28, R.59, E.63, L.81
- Chain P: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Ligands: PFL.71
8 PLIP interactions:3 interactions with chain I, 5 interactions with chain P- Hydrophobic interactions: I:Y.28, I:R.59, I:L.81, P:L.24, P:Y.28, P:L.31, P:R.59, P:L.81
PFL.135: 14 residues within 4Å:- Chain E: L.24, S.27, Y.28, R.59, E.63, L.81
- Chain Q: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Ligands: PFL.39
8 PLIP interactions:3 interactions with chain E, 5 interactions with chain Q- Hydrophobic interactions: E:Y.28, E:R.59, E:L.81, Q:L.24, Q:Y.28, Q:L.31, Q:R.59, Q:L.81
PFL.143: 14 residues within 4Å:- Chain H: L.24, S.27, Y.28, R.59, E.63, L.81
- Chain R: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Ligands: PFL.63
8 PLIP interactions:3 interactions with chain H, 5 interactions with chain R- Hydrophobic interactions: H:Y.28, H:R.59, H:L.81, R:L.24, R:Y.28, R:L.31, R:R.59, R:L.81
PFL.151: 14 residues within 4Å:- Chain G: L.24, S.27, Y.28, R.59, E.63, L.81
- Chain S: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Ligands: PFL.55
8 PLIP interactions:5 interactions with chain S, 3 interactions with chain G- Hydrophobic interactions: S:L.24, S:Y.28, S:L.31, S:R.59, S:L.81, G:Y.28, G:R.59, G:L.81
PFL.159: 14 residues within 4Å:- Chain F: L.24, S.27, Y.28, R.59, E.63, L.81
- Chain T: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Ligands: PFL.47
8 PLIP interactions:3 interactions with chain F, 5 interactions with chain T- Hydrophobic interactions: F:Y.28, F:R.59, F:L.81, T:L.24, T:Y.28, T:L.31, T:R.59, T:L.81
PFL.167: 14 residues within 4Å:- Chain D: L.24, S.27, Y.28, R.59, E.63, L.81
- Chain U: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Ligands: PFL.31
8 PLIP interactions:5 interactions with chain U, 3 interactions with chain D- Hydrophobic interactions: U:L.24, U:Y.28, U:L.31, U:R.59, U:L.81, D:Y.28, D:R.59, D:L.81
PFL.175: 14 residues within 4Å:- Chain A: L.24, S.27, Y.28, R.59, E.63, L.81
- Chain V: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Ligands: PFL.7
8 PLIP interactions:3 interactions with chain A, 5 interactions with chain V- Hydrophobic interactions: A:Y.28, A:R.59, A:L.81, V:L.24, V:Y.28, V:L.31, V:R.59, V:L.81
PFL.183: 14 residues within 4Å:- Chain B: L.24, S.27, Y.28, R.59, E.63, L.81
- Chain W: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Ligands: PFL.15
8 PLIP interactions:3 interactions with chain B, 5 interactions with chain W- Hydrophobic interactions: B:Y.28, B:R.59, B:L.81, W:L.24, W:Y.28, W:L.31, W:R.59, W:L.81
PFL.191: 14 residues within 4Å:- Chain C: L.24, S.27, Y.28, R.59, E.63, L.81
- Chain X: L.24, S.27, Y.28, L.31, A.55, R.59, L.81
- Ligands: PFL.23
8 PLIP interactions:3 interactions with chain C, 5 interactions with chain X- Hydrophobic interactions: C:Y.28, C:R.59, C:L.81, X:L.24, X:Y.28, X:L.31, X:R.59, X:L.81
- 24 x SO4: SULFATE ION(Non-functional Binders)
SO4.8: 3 residues within 4Å:- Chain A: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.16: 3 residues within 4Å:- Chain B: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.24: 3 residues within 4Å:- Chain C: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.32: 3 residues within 4Å:- Chain D: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.40: 3 residues within 4Å:- Chain E: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.48: 3 residues within 4Å:- Chain F: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.56: 3 residues within 4Å:- Chain G: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.64: 3 residues within 4Å:- Chain H: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.72: 3 residues within 4Å:- Chain I: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.80: 3 residues within 4Å:- Chain J: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.88: 3 residues within 4Å:- Chain K: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.96: 3 residues within 4Å:- Chain L: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.104: 3 residues within 4Å:- Chain M: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.112: 3 residues within 4Å:- Chain N: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.120: 3 residues within 4Å:- Chain O: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.128: 3 residues within 4Å:- Chain P: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.136: 3 residues within 4Å:- Chain Q: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.144: 3 residues within 4Å:- Chain R: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.152: 3 residues within 4Å:- Chain S: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.160: 3 residues within 4Å:- Chain T: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.168: 3 residues within 4Å:- Chain U: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.176: 3 residues within 4Å:- Chain V: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.184: 3 residues within 4Å:- Chain W: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.192: 3 residues within 4Å:- Chain X: R.5, Q.6, N.7
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Vedula, L.S. et al., A unitary anesthetic binding site at high resolution. J.Biol.Chem. (2009)
- Release Date
- 2009-07-14
- Peptides
- Ferritin light chain: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-24-mer
- Ligands
- 144 x CD: CADMIUM ION(Non-covalent)
- 24 x PFL: 2,6-BIS(1-METHYLETHYL)PHENOL(Non-covalent)
- 24 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Vedula, L.S. et al., A unitary anesthetic binding site at high resolution. J.Biol.Chem. (2009)
- Release Date
- 2009-07-14
- Peptides
- Ferritin light chain: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A