- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.68 Å
- Oligo State
- homo-24-mer
- Ligands
- 120 x CD: CADMIUM ION(Non-covalent)
- 24 x DIE: 2,6-diethylphenol(Non-covalent)
DIE.6: 9 residues within 4Å:- Chain A: L.24, S.27, Y.28, A.55, R.59, L.81
- Chain V: S.27, R.59
- Ligands: DIE.216
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:Y.28, A:L.81
DIE.16: 9 residues within 4Å:- Chain B: L.24, S.27, Y.28, A.55, R.59, L.81
- Chain W: S.27, R.59
- Ligands: DIE.226
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:Y.28, B:L.81
DIE.26: 9 residues within 4Å:- Chain C: L.24, S.27, Y.28, A.55, R.59, L.81
- Chain X: S.27, R.59
- Ligands: DIE.236
2 PLIP interactions:2 interactions with chain C- Hydrophobic interactions: C:Y.28, C:L.81
DIE.36: 9 residues within 4Å:- Chain D: L.24, S.27, Y.28, A.55, R.59, L.81
- Chain U: S.27, R.59
- Ligands: DIE.206
2 PLIP interactions:2 interactions with chain D- Hydrophobic interactions: D:Y.28, D:L.81
DIE.46: 9 residues within 4Å:- Chain E: L.24, S.27, Y.28, A.55, R.59, L.81
- Chain Q: S.27, R.59
- Ligands: DIE.166
2 PLIP interactions:2 interactions with chain E- Hydrophobic interactions: E:Y.28, E:L.81
DIE.56: 9 residues within 4Å:- Chain F: L.24, S.27, Y.28, A.55, R.59, L.81
- Chain T: S.27, R.59
- Ligands: DIE.196
2 PLIP interactions:2 interactions with chain F- Hydrophobic interactions: F:Y.28, F:L.81
DIE.66: 9 residues within 4Å:- Chain G: L.24, S.27, Y.28, A.55, R.59, L.81
- Chain S: S.27, R.59
- Ligands: DIE.186
2 PLIP interactions:2 interactions with chain G- Hydrophobic interactions: G:Y.28, G:L.81
DIE.76: 9 residues within 4Å:- Chain H: L.24, S.27, Y.28, A.55, R.59, L.81
- Chain R: S.27, R.59
- Ligands: DIE.176
2 PLIP interactions:2 interactions with chain H- Hydrophobic interactions: H:Y.28, H:L.81
DIE.86: 9 residues within 4Å:- Chain I: L.24, S.27, Y.28, A.55, R.59, L.81
- Chain P: S.27, R.59
- Ligands: DIE.156
2 PLIP interactions:2 interactions with chain I- Hydrophobic interactions: I:Y.28, I:L.81
DIE.96: 9 residues within 4Å:- Chain J: L.24, S.27, Y.28, A.55, R.59, L.81
- Chain M: S.27, R.59
- Ligands: DIE.126
2 PLIP interactions:2 interactions with chain J- Hydrophobic interactions: J:Y.28, J:L.81
DIE.106: 9 residues within 4Å:- Chain K: L.24, S.27, Y.28, A.55, R.59, L.81
- Chain N: S.27, R.59
- Ligands: DIE.136
2 PLIP interactions:2 interactions with chain K- Hydrophobic interactions: K:Y.28, K:L.81
DIE.116: 9 residues within 4Å:- Chain L: L.24, S.27, Y.28, A.55, R.59, L.81
- Chain O: S.27, R.59
- Ligands: DIE.146
2 PLIP interactions:2 interactions with chain L- Hydrophobic interactions: L:Y.28, L:L.81
DIE.126: 9 residues within 4Å:- Chain J: S.27, R.59
- Chain M: L.24, S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.96
2 PLIP interactions:2 interactions with chain M- Hydrophobic interactions: M:Y.28, M:L.81
DIE.136: 9 residues within 4Å:- Chain K: S.27, R.59
- Chain N: L.24, S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.106
2 PLIP interactions:2 interactions with chain N- Hydrophobic interactions: N:Y.28, N:L.81
DIE.146: 9 residues within 4Å:- Chain L: S.27, R.59
- Chain O: L.24, S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.116
2 PLIP interactions:2 interactions with chain O- Hydrophobic interactions: O:Y.28, O:L.81
DIE.156: 9 residues within 4Å:- Chain I: S.27, R.59
- Chain P: L.24, S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.86
2 PLIP interactions:2 interactions with chain P- Hydrophobic interactions: P:Y.28, P:L.81
DIE.166: 9 residues within 4Å:- Chain E: S.27, R.59
- Chain Q: L.24, S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.46
2 PLIP interactions:2 interactions with chain Q- Hydrophobic interactions: Q:Y.28, Q:L.81
DIE.176: 9 residues within 4Å:- Chain H: S.27, R.59
- Chain R: L.24, S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.76
2 PLIP interactions:2 interactions with chain R- Hydrophobic interactions: R:Y.28, R:L.81
DIE.186: 9 residues within 4Å:- Chain G: S.27, R.59
- Chain S: L.24, S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.66
2 PLIP interactions:2 interactions with chain S- Hydrophobic interactions: S:Y.28, S:L.81
DIE.196: 9 residues within 4Å:- Chain F: S.27, R.59
- Chain T: L.24, S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.56
2 PLIP interactions:2 interactions with chain T- Hydrophobic interactions: T:Y.28, T:L.81
DIE.206: 9 residues within 4Å:- Chain D: S.27, R.59
- Chain U: L.24, S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.36
2 PLIP interactions:2 interactions with chain U- Hydrophobic interactions: U:Y.28, U:L.81
DIE.216: 9 residues within 4Å:- Chain A: S.27, R.59
- Chain V: L.24, S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.6
2 PLIP interactions:2 interactions with chain V- Hydrophobic interactions: V:Y.28, V:L.81
DIE.226: 9 residues within 4Å:- Chain B: S.27, R.59
- Chain W: L.24, S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.16
2 PLIP interactions:2 interactions with chain W- Hydrophobic interactions: W:Y.28, W:L.81
DIE.236: 9 residues within 4Å:- Chain C: S.27, R.59
- Chain X: L.24, S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.26
2 PLIP interactions:2 interactions with chain X- Hydrophobic interactions: X:Y.28, X:L.81
- 72 x SO4: SULFATE ION(Non-functional Binders)
SO4.7: 2 residues within 4Å:- Chain A: Q.6, N.7
Ligand excluded by PLIPSO4.8: 4 residues within 4Å:- Chain A: K.143, D.146, H.147
- Chain P: E.45
Ligand excluded by PLIPSO4.9: 1 residues within 4Å:- Chain A: K.83
Ligand excluded by PLIPSO4.17: 2 residues within 4Å:- Chain B: Q.6, N.7
Ligand excluded by PLIPSO4.18: 4 residues within 4Å:- Chain B: K.143, D.146, H.147
- Chain O: E.45
Ligand excluded by PLIPSO4.19: 1 residues within 4Å:- Chain B: K.83
Ligand excluded by PLIPSO4.27: 2 residues within 4Å:- Chain C: Q.6, N.7
Ligand excluded by PLIPSO4.28: 4 residues within 4Å:- Chain C: K.143, D.146, H.147
- Chain M: E.45
Ligand excluded by PLIPSO4.29: 1 residues within 4Å:- Chain C: K.83
Ligand excluded by PLIPSO4.37: 2 residues within 4Å:- Chain D: Q.6, N.7
Ligand excluded by PLIPSO4.38: 4 residues within 4Å:- Chain D: K.143, D.146, H.147
- Chain N: E.45
Ligand excluded by PLIPSO4.39: 1 residues within 4Å:- Chain D: K.83
Ligand excluded by PLIPSO4.47: 2 residues within 4Å:- Chain E: Q.6, N.7
Ligand excluded by PLIPSO4.48: 4 residues within 4Å:- Chain E: K.143, D.146, H.147
- Chain V: E.45
Ligand excluded by PLIPSO4.49: 1 residues within 4Å:- Chain E: K.83
Ligand excluded by PLIPSO4.57: 2 residues within 4Å:- Chain F: Q.6, N.7
Ligand excluded by PLIPSO4.58: 4 residues within 4Å:- Chain F: K.143, D.146, H.147
- Chain U: E.45
Ligand excluded by PLIPSO4.59: 1 residues within 4Å:- Chain F: K.83
Ligand excluded by PLIPSO4.67: 2 residues within 4Å:- Chain G: Q.6, N.7
Ligand excluded by PLIPSO4.68: 4 residues within 4Å:- Chain G: K.143, D.146, H.147
- Chain W: E.45
Ligand excluded by PLIPSO4.69: 1 residues within 4Å:- Chain G: K.83
Ligand excluded by PLIPSO4.77: 2 residues within 4Å:- Chain H: Q.6, N.7
Ligand excluded by PLIPSO4.78: 4 residues within 4Å:- Chain H: K.143, D.146, H.147
- Chain X: E.45
Ligand excluded by PLIPSO4.79: 1 residues within 4Å:- Chain H: K.83
Ligand excluded by PLIPSO4.87: 2 residues within 4Å:- Chain I: Q.6, N.7
Ligand excluded by PLIPSO4.88: 4 residues within 4Å:- Chain I: K.143, D.146, H.147
- Chain Q: E.45
Ligand excluded by PLIPSO4.89: 1 residues within 4Å:- Chain I: K.83
Ligand excluded by PLIPSO4.97: 2 residues within 4Å:- Chain J: Q.6, N.7
Ligand excluded by PLIPSO4.98: 4 residues within 4Å:- Chain J: K.143, D.146, H.147
- Chain R: E.45
Ligand excluded by PLIPSO4.99: 1 residues within 4Å:- Chain J: K.83
Ligand excluded by PLIPSO4.107: 2 residues within 4Å:- Chain K: Q.6, N.7
Ligand excluded by PLIPSO4.108: 4 residues within 4Å:- Chain K: K.143, D.146, H.147
- Chain T: E.45
Ligand excluded by PLIPSO4.109: 1 residues within 4Å:- Chain K: K.83
Ligand excluded by PLIPSO4.117: 2 residues within 4Å:- Chain L: Q.6, N.7
Ligand excluded by PLIPSO4.118: 4 residues within 4Å:- Chain L: K.143, D.146, H.147
- Chain S: E.45
Ligand excluded by PLIPSO4.119: 1 residues within 4Å:- Chain L: K.83
Ligand excluded by PLIPSO4.127: 2 residues within 4Å:- Chain M: Q.6, N.7
Ligand excluded by PLIPSO4.128: 4 residues within 4Å:- Chain D: E.45
- Chain M: K.143, D.146, H.147
Ligand excluded by PLIPSO4.129: 1 residues within 4Å:- Chain M: K.83
Ligand excluded by PLIPSO4.137: 2 residues within 4Å:- Chain N: Q.6, N.7
Ligand excluded by PLIPSO4.138: 4 residues within 4Å:- Chain C: E.45
- Chain N: K.143, D.146, H.147
Ligand excluded by PLIPSO4.139: 1 residues within 4Å:- Chain N: K.83
Ligand excluded by PLIPSO4.147: 2 residues within 4Å:- Chain O: Q.6, N.7
Ligand excluded by PLIPSO4.148: 4 residues within 4Å:- Chain A: E.45
- Chain O: K.143, D.146, H.147
Ligand excluded by PLIPSO4.149: 1 residues within 4Å:- Chain O: K.83
Ligand excluded by PLIPSO4.157: 2 residues within 4Å:- Chain P: Q.6, N.7
Ligand excluded by PLIPSO4.158: 4 residues within 4Å:- Chain B: E.45
- Chain P: K.143, D.146, H.147
Ligand excluded by PLIPSO4.159: 1 residues within 4Å:- Chain P: K.83
Ligand excluded by PLIPSO4.167: 2 residues within 4Å:- Chain Q: Q.6, N.7
Ligand excluded by PLIPSO4.168: 4 residues within 4Å:- Chain J: E.45
- Chain Q: K.143, D.146, H.147
Ligand excluded by PLIPSO4.169: 1 residues within 4Å:- Chain Q: K.83
Ligand excluded by PLIPSO4.177: 2 residues within 4Å:- Chain R: Q.6, N.7
Ligand excluded by PLIPSO4.178: 4 residues within 4Å:- Chain I: E.45
- Chain R: K.143, D.146, H.147
Ligand excluded by PLIPSO4.179: 1 residues within 4Å:- Chain R: K.83
Ligand excluded by PLIPSO4.187: 2 residues within 4Å:- Chain S: Q.6, N.7
Ligand excluded by PLIPSO4.188: 4 residues within 4Å:- Chain K: E.45
- Chain S: K.143, D.146, H.147
Ligand excluded by PLIPSO4.189: 1 residues within 4Å:- Chain S: K.83
Ligand excluded by PLIPSO4.197: 2 residues within 4Å:- Chain T: Q.6, N.7
Ligand excluded by PLIPSO4.198: 4 residues within 4Å:- Chain L: E.45
- Chain T: K.143, D.146, H.147
Ligand excluded by PLIPSO4.199: 1 residues within 4Å:- Chain T: K.83
Ligand excluded by PLIPSO4.207: 2 residues within 4Å:- Chain U: Q.6, N.7
Ligand excluded by PLIPSO4.208: 4 residues within 4Å:- Chain E: E.45
- Chain U: K.143, D.146, H.147
Ligand excluded by PLIPSO4.209: 1 residues within 4Å:- Chain U: K.83
Ligand excluded by PLIPSO4.217: 2 residues within 4Å:- Chain V: Q.6, N.7
Ligand excluded by PLIPSO4.218: 4 residues within 4Å:- Chain F: E.45
- Chain V: K.143, D.146, H.147
Ligand excluded by PLIPSO4.219: 1 residues within 4Å:- Chain V: K.83
Ligand excluded by PLIPSO4.227: 2 residues within 4Å:- Chain W: Q.6, N.7
Ligand excluded by PLIPSO4.228: 4 residues within 4Å:- Chain H: E.45
- Chain W: K.143, D.146, H.147
Ligand excluded by PLIPSO4.229: 1 residues within 4Å:- Chain W: K.83
Ligand excluded by PLIPSO4.237: 2 residues within 4Å:- Chain X: Q.6, N.7
Ligand excluded by PLIPSO4.238: 4 residues within 4Å:- Chain G: E.45
- Chain X: K.143, D.146, H.147
Ligand excluded by PLIPSO4.239: 1 residues within 4Å:- Chain X: K.83
Ligand excluded by PLIP- 24 x ACT: ACETATE ION(Non-functional Binders)
ACT.10: 5 residues within 4Å:- Chain A: D.127, F.128, S.131, H.132
- Chain E: D.135
Ligand excluded by PLIPACT.20: 5 residues within 4Å:- Chain B: D.127, F.128, S.131, H.132
- Chain G: D.135
Ligand excluded by PLIPACT.30: 5 residues within 4Å:- Chain C: D.127, F.128, S.131, H.132
- Chain H: D.135
Ligand excluded by PLIPACT.40: 5 residues within 4Å:- Chain D: D.127, F.128, S.131, H.132
- Chain F: D.135
Ligand excluded by PLIPACT.50: 5 residues within 4Å:- Chain E: D.127, F.128, S.131, H.132
- Chain I: D.135
Ligand excluded by PLIPACT.60: 5 residues within 4Å:- Chain F: D.127, F.128, S.131, H.132
- Chain K: D.135
Ligand excluded by PLIPACT.70: 5 residues within 4Å:- Chain G: D.127, F.128, S.131, H.132
- Chain L: D.135
Ligand excluded by PLIPACT.80: 5 residues within 4Å:- Chain H: D.127, F.128, S.131, H.132
- Chain J: D.135
Ligand excluded by PLIPACT.90: 5 residues within 4Å:- Chain A: D.135
- Chain I: D.127, F.128, S.131, H.132
Ligand excluded by PLIPACT.100: 5 residues within 4Å:- Chain C: D.135
- Chain J: D.127, F.128, S.131, H.132
Ligand excluded by PLIPACT.110: 5 residues within 4Å:- Chain D: D.135
- Chain K: D.127, F.128, S.131, H.132
Ligand excluded by PLIPACT.120: 5 residues within 4Å:- Chain B: D.135
- Chain L: D.127, F.128, S.131, H.132
Ligand excluded by PLIPACT.130: 5 residues within 4Å:- Chain M: D.127, F.128, S.131, H.132
- Chain Q: D.135
Ligand excluded by PLIPACT.140: 5 residues within 4Å:- Chain N: D.127, F.128, S.131, H.132
- Chain S: D.135
Ligand excluded by PLIPACT.150: 5 residues within 4Å:- Chain O: D.127, F.128, S.131, H.132
- Chain T: D.135
Ligand excluded by PLIPACT.160: 5 residues within 4Å:- Chain P: D.127, F.128, S.131, H.132
- Chain R: D.135
Ligand excluded by PLIPACT.170: 5 residues within 4Å:- Chain Q: D.127, F.128, S.131, H.132
- Chain U: D.135
Ligand excluded by PLIPACT.180: 5 residues within 4Å:- Chain R: D.127, F.128, S.131, H.132
- Chain W: D.135
Ligand excluded by PLIPACT.190: 5 residues within 4Å:- Chain S: D.127, F.128, S.131, H.132
- Chain X: D.135
Ligand excluded by PLIPACT.200: 5 residues within 4Å:- Chain T: D.127, F.128, S.131, H.132
- Chain V: D.135
Ligand excluded by PLIPACT.210: 5 residues within 4Å:- Chain M: D.135
- Chain U: D.127, F.128, S.131, H.132
Ligand excluded by PLIPACT.220: 5 residues within 4Å:- Chain O: D.135
- Chain V: D.127, F.128, S.131, H.132
Ligand excluded by PLIPACT.230: 5 residues within 4Å:- Chain P: D.135
- Chain W: D.127, F.128, S.131, H.132
Ligand excluded by PLIPACT.240: 5 residues within 4Å:- Chain N: D.135
- Chain X: D.127, F.128, S.131, H.132
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Vedula, L.S. et al., A unitary anesthetic binding site at high resolution. J.Biol.Chem. (2009)
- Release Date
- 2009-07-14
- Peptides
- Ferritin light chain: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.68 Å
- Oligo State
- homo-24-mer
- Ligands
- 120 x CD: CADMIUM ION(Non-covalent)
- 24 x DIE: 2,6-diethylphenol(Non-covalent)
- 72 x SO4: SULFATE ION(Non-functional Binders)
- 24 x ACT: ACETATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Vedula, L.S. et al., A unitary anesthetic binding site at high resolution. J.Biol.Chem. (2009)
- Release Date
- 2009-07-14
- Peptides
- Ferritin light chain: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A