- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.92 Å
- Oligo State
- homo-24-mer
- Ligands
- 168 x CD: CADMIUM ION(Non-covalent)
- 24 x DIE: 2,6-diethylphenol(Non-covalent)
DIE.8: 8 residues within 4Å:- Chain A: S.27, Y.28, A.55, R.59, L.81
- Chain V: S.27, R.59
- Ligands: DIE.239
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:Y.28, A:R.59, A:L.81
DIE.19: 8 residues within 4Å:- Chain B: S.27, Y.28, A.55, R.59, L.81
- Chain W: S.27, R.59
- Ligands: DIE.250
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:Y.28, B:R.59, B:L.81
DIE.30: 8 residues within 4Å:- Chain C: S.27, Y.28, A.55, R.59, L.81
- Chain X: S.27, R.59
- Ligands: DIE.261
3 PLIP interactions:3 interactions with chain C- Hydrophobic interactions: C:Y.28, C:R.59, C:L.81
DIE.41: 8 residues within 4Å:- Chain D: S.27, Y.28, A.55, R.59, L.81
- Chain U: S.27, R.59
- Ligands: DIE.228
3 PLIP interactions:3 interactions with chain D- Hydrophobic interactions: D:Y.28, D:R.59, D:L.81
DIE.52: 8 residues within 4Å:- Chain E: S.27, Y.28, A.55, R.59, L.81
- Chain Q: S.27, R.59
- Ligands: DIE.184
3 PLIP interactions:3 interactions with chain E- Hydrophobic interactions: E:Y.28, E:R.59, E:L.81
DIE.63: 8 residues within 4Å:- Chain F: S.27, Y.28, A.55, R.59, L.81
- Chain T: S.27, R.59
- Ligands: DIE.217
3 PLIP interactions:3 interactions with chain F- Hydrophobic interactions: F:Y.28, F:R.59, F:L.81
DIE.74: 8 residues within 4Å:- Chain G: S.27, Y.28, A.55, R.59, L.81
- Chain S: S.27, R.59
- Ligands: DIE.206
3 PLIP interactions:3 interactions with chain G- Hydrophobic interactions: G:Y.28, G:R.59, G:L.81
DIE.85: 8 residues within 4Å:- Chain H: S.27, Y.28, A.55, R.59, L.81
- Chain R: S.27, R.59
- Ligands: DIE.195
3 PLIP interactions:3 interactions with chain H- Hydrophobic interactions: H:Y.28, H:R.59, H:L.81
DIE.96: 8 residues within 4Å:- Chain I: S.27, Y.28, A.55, R.59, L.81
- Chain P: S.27, R.59
- Ligands: DIE.173
3 PLIP interactions:3 interactions with chain I- Hydrophobic interactions: I:Y.28, I:R.59, I:L.81
DIE.107: 8 residues within 4Å:- Chain J: S.27, Y.28, A.55, R.59, L.81
- Chain M: S.27, R.59
- Ligands: DIE.140
3 PLIP interactions:3 interactions with chain J- Hydrophobic interactions: J:Y.28, J:R.59, J:L.81
DIE.118: 8 residues within 4Å:- Chain K: S.27, Y.28, A.55, R.59, L.81
- Chain N: S.27, R.59
- Ligands: DIE.151
3 PLIP interactions:3 interactions with chain K- Hydrophobic interactions: K:Y.28, K:R.59, K:L.81
DIE.129: 8 residues within 4Å:- Chain L: S.27, Y.28, A.55, R.59, L.81
- Chain O: S.27, R.59
- Ligands: DIE.162
3 PLIP interactions:3 interactions with chain L- Hydrophobic interactions: L:Y.28, L:R.59, L:L.81
DIE.140: 8 residues within 4Å:- Chain J: S.27, R.59
- Chain M: S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.107
3 PLIP interactions:3 interactions with chain M- Hydrophobic interactions: M:Y.28, M:R.59, M:L.81
DIE.151: 8 residues within 4Å:- Chain K: S.27, R.59
- Chain N: S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.118
3 PLIP interactions:3 interactions with chain N- Hydrophobic interactions: N:Y.28, N:R.59, N:L.81
DIE.162: 8 residues within 4Å:- Chain L: S.27, R.59
- Chain O: S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.129
3 PLIP interactions:3 interactions with chain O- Hydrophobic interactions: O:Y.28, O:R.59, O:L.81
DIE.173: 8 residues within 4Å:- Chain I: S.27, R.59
- Chain P: S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.96
3 PLIP interactions:3 interactions with chain P- Hydrophobic interactions: P:Y.28, P:R.59, P:L.81
DIE.184: 8 residues within 4Å:- Chain E: S.27, R.59
- Chain Q: S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.52
3 PLIP interactions:3 interactions with chain Q- Hydrophobic interactions: Q:Y.28, Q:R.59, Q:L.81
DIE.195: 8 residues within 4Å:- Chain H: S.27, R.59
- Chain R: S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.85
3 PLIP interactions:3 interactions with chain R- Hydrophobic interactions: R:Y.28, R:R.59, R:L.81
DIE.206: 8 residues within 4Å:- Chain G: S.27, R.59
- Chain S: S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.74
3 PLIP interactions:3 interactions with chain S- Hydrophobic interactions: S:Y.28, S:R.59, S:L.81
DIE.217: 8 residues within 4Å:- Chain F: S.27, R.59
- Chain T: S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.63
3 PLIP interactions:3 interactions with chain T- Hydrophobic interactions: T:Y.28, T:R.59, T:L.81
DIE.228: 8 residues within 4Å:- Chain D: S.27, R.59
- Chain U: S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.41
3 PLIP interactions:3 interactions with chain U- Hydrophobic interactions: U:Y.28, U:R.59, U:L.81
DIE.239: 8 residues within 4Å:- Chain A: S.27, R.59
- Chain V: S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.8
3 PLIP interactions:3 interactions with chain V- Hydrophobic interactions: V:Y.28, V:R.59, V:L.81
DIE.250: 8 residues within 4Å:- Chain B: S.27, R.59
- Chain W: S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.19
3 PLIP interactions:3 interactions with chain W- Hydrophobic interactions: W:Y.28, W:R.59, W:L.81
DIE.261: 8 residues within 4Å:- Chain C: S.27, R.59
- Chain X: S.27, Y.28, A.55, R.59, L.81
- Ligands: DIE.30
3 PLIP interactions:3 interactions with chain X- Hydrophobic interactions: X:Y.28, X:R.59, X:L.81
- 72 x SO4: SULFATE ION(Non-functional Binders)
SO4.9: 3 residues within 4Å:- Chain A: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.10: 4 residues within 4Å:- Chain A: K.143, D.146, H.147
- Chain P: E.45
Ligand excluded by PLIPSO4.11: 3 residues within 4Å:- Chain A: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.20: 3 residues within 4Å:- Chain B: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.21: 4 residues within 4Å:- Chain B: K.143, D.146, H.147
- Chain O: E.45
Ligand excluded by PLIPSO4.22: 3 residues within 4Å:- Chain B: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.31: 3 residues within 4Å:- Chain C: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.32: 4 residues within 4Å:- Chain C: K.143, D.146, H.147
- Chain M: E.45
Ligand excluded by PLIPSO4.33: 3 residues within 4Å:- Chain C: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.42: 3 residues within 4Å:- Chain D: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.43: 4 residues within 4Å:- Chain D: K.143, D.146, H.147
- Chain N: E.45
Ligand excluded by PLIPSO4.44: 3 residues within 4Å:- Chain D: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.53: 3 residues within 4Å:- Chain E: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.54: 4 residues within 4Å:- Chain E: K.143, D.146, H.147
- Chain V: E.45
Ligand excluded by PLIPSO4.55: 3 residues within 4Å:- Chain E: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.64: 3 residues within 4Å:- Chain F: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.65: 4 residues within 4Å:- Chain F: K.143, D.146, H.147
- Chain U: E.45
Ligand excluded by PLIPSO4.66: 3 residues within 4Å:- Chain F: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.75: 3 residues within 4Å:- Chain G: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.76: 4 residues within 4Å:- Chain G: K.143, D.146, H.147
- Chain W: E.45
Ligand excluded by PLIPSO4.77: 3 residues within 4Å:- Chain G: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.86: 3 residues within 4Å:- Chain H: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.87: 4 residues within 4Å:- Chain H: K.143, D.146, H.147
- Chain X: E.45
Ligand excluded by PLIPSO4.88: 3 residues within 4Å:- Chain H: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.97: 3 residues within 4Å:- Chain I: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.98: 4 residues within 4Å:- Chain I: K.143, D.146, H.147
- Chain Q: E.45
Ligand excluded by PLIPSO4.99: 3 residues within 4Å:- Chain I: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.108: 3 residues within 4Å:- Chain J: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.109: 4 residues within 4Å:- Chain J: K.143, D.146, H.147
- Chain R: E.45
Ligand excluded by PLIPSO4.110: 3 residues within 4Å:- Chain J: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.119: 3 residues within 4Å:- Chain K: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.120: 4 residues within 4Å:- Chain K: K.143, D.146, H.147
- Chain T: E.45
Ligand excluded by PLIPSO4.121: 3 residues within 4Å:- Chain K: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.130: 3 residues within 4Å:- Chain L: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.131: 4 residues within 4Å:- Chain L: K.143, D.146, H.147
- Chain S: E.45
Ligand excluded by PLIPSO4.132: 3 residues within 4Å:- Chain L: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.141: 3 residues within 4Å:- Chain M: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.142: 4 residues within 4Å:- Chain D: E.45
- Chain M: K.143, D.146, H.147
Ligand excluded by PLIPSO4.143: 3 residues within 4Å:- Chain M: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.152: 3 residues within 4Å:- Chain N: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.153: 4 residues within 4Å:- Chain C: E.45
- Chain N: K.143, D.146, H.147
Ligand excluded by PLIPSO4.154: 3 residues within 4Å:- Chain N: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.163: 3 residues within 4Å:- Chain O: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.164: 4 residues within 4Å:- Chain A: E.45
- Chain O: K.143, D.146, H.147
Ligand excluded by PLIPSO4.165: 3 residues within 4Å:- Chain O: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.174: 3 residues within 4Å:- Chain P: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.175: 4 residues within 4Å:- Chain B: E.45
- Chain P: K.143, D.146, H.147
Ligand excluded by PLIPSO4.176: 3 residues within 4Å:- Chain P: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.185: 3 residues within 4Å:- Chain Q: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.186: 4 residues within 4Å:- Chain J: E.45
- Chain Q: K.143, D.146, H.147
Ligand excluded by PLIPSO4.187: 3 residues within 4Å:- Chain Q: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.196: 3 residues within 4Å:- Chain R: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.197: 4 residues within 4Å:- Chain I: E.45
- Chain R: K.143, D.146, H.147
Ligand excluded by PLIPSO4.198: 3 residues within 4Å:- Chain R: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.207: 3 residues within 4Å:- Chain S: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.208: 4 residues within 4Å:- Chain K: E.45
- Chain S: K.143, D.146, H.147
Ligand excluded by PLIPSO4.209: 3 residues within 4Å:- Chain S: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.218: 3 residues within 4Å:- Chain T: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.219: 4 residues within 4Å:- Chain L: E.45
- Chain T: K.143, D.146, H.147
Ligand excluded by PLIPSO4.220: 3 residues within 4Å:- Chain T: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.229: 3 residues within 4Å:- Chain U: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.230: 4 residues within 4Å:- Chain E: E.45
- Chain U: K.143, D.146, H.147
Ligand excluded by PLIPSO4.231: 3 residues within 4Å:- Chain U: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.240: 3 residues within 4Å:- Chain V: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.241: 4 residues within 4Å:- Chain F: E.45
- Chain V: K.143, D.146, H.147
Ligand excluded by PLIPSO4.242: 3 residues within 4Å:- Chain V: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.251: 3 residues within 4Å:- Chain W: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.252: 4 residues within 4Å:- Chain H: E.45
- Chain W: K.143, D.146, H.147
Ligand excluded by PLIPSO4.253: 3 residues within 4Å:- Chain W: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.262: 3 residues within 4Å:- Chain X: R.5, Q.6, N.7
Ligand excluded by PLIPSO4.263: 4 residues within 4Å:- Chain G: E.45
- Chain X: K.143, D.146, H.147
Ligand excluded by PLIPSO4.264: 3 residues within 4Å:- Chain X: Q.86, D.87, E.88
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Vedula, L.S. et al., A unitary anesthetic binding site at high resolution. J.Biol.Chem. (2009)
- Release Date
- 2009-07-14
- Peptides
- Ferritin light chain: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.92 Å
- Oligo State
- homo-24-mer
- Ligands
- 168 x CD: CADMIUM ION(Non-covalent)
- 24 x DIE: 2,6-diethylphenol(Non-covalent)
- 72 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Vedula, L.S. et al., A unitary anesthetic binding site at high resolution. J.Biol.Chem. (2009)
- Release Date
- 2009-07-14
- Peptides
- Ferritin light chain: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A