SMTL ID : 3f7d.1

SF-1 LBD bound by phosphatidylcholine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-1-mer

Ligands

1 x P42: (2S)-2-{[(1R)-1-hydroxyhexadecyl]oxy}-3-{[(1R)-1-hydroxyoctadecyl]oxy}propyl 2-(trimethylammonio)ethyl phosphate(Non-covalent)

P42.1: 22 residues within 4Å: Chain A: P.44, F.45, L.48, C.49, A.52, W.85, S.86, V.90, H.93, V.114, V.119, Q.122, A.123, G.124, L.127, L.130, V.131, A.134, A.216, Y.219, L.220, K.223 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:F.45, A:L.48, A:L.48, A:A.52, A:W.85, A:H.93, A:V.114, A:L.127, A:L.130, A:V.131, A:A.134, A:A.216, A:Y.219, A:L.220, A:L.220 Hydrogen bonds: A:Q.122, A:G.124 Water bridges: A:L.127 Salt bridges: A:K.223

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sablin, E.P. et al., Structure of SF-1 bound by different phospholipids: evidence for regulatory ligands. Mol.Endocrinol. (2009)

Release Date

2008-12-09

Peptides

nuclear receptor SF-1: A
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

nuclear receptor SF-1

Peroxisome proliferator-activated receptor gamma coactivator 1-alpha

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