SMTL ID : 6fzj.1 (1 other biounit)

PPAR gamma mutant complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

hetero-1-1-mer

Ligands

1 x EDK: (2~{S})-3-[4-[2-[methyl(pyridin-2-yl)amino]ethoxy]phenyl]-2-[[2-(phenylcarbonyl)phenyl]amino]propanoic acid(Non-covalent)

EDK.1: 20 residues within 4Å: Chain A: F.62, I.79, F.80, G.82, C.83, Q.84, S.87, H.121, I.124, Y.125, L.128, I.139, M.146, F.158, F.161, M.162, H.247, L.251, L.267, Y.271 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:F.62, A:I.79, A:F.80, A:Q.84, A:I.124, A:Y.125, A:L.128, A:F.158, A:F.161, A:F.161, A:F.161, A:F.161, A:L.267 Hydrogen bonds: A:S.87 Salt bridges: A:H.121, A:H.247

1 x IOD: IODIDE ION(Non-functional Binders)

IOD.2: 1 residues within 4Å: Chain A: S.140 Ligand excluded by PLIP

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 2 residues within 4Å: Chain A: N.133, N.173 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain A: Q.81, D.260 Ligand excluded by PLIP CL.5: 3 residues within 4Å: Chain A: H.223, P.224, E.225 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rochel, N. et al., Recurrent activating mutations of PPAR gamma associated with luminal bladder tumors. Nat Commun (2019)

Release Date

2019-02-13

Peptides

Peroxisome proliferator-activated receptor gamma: A
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Peroxisome proliferator-activated receptor gamma

Peroxisome proliferator-activated receptor gamma coactivator 1-alpha

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