SMTL ID : 3fbv.4 (7 other biounits)

Crystal structure of the oligomer formed by the kinase-ribonuclease domain of Ire1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-dimer

Ligands

2 x APJ: N~2~-1H-benzimidazol-5-yl-N~4~-(3-cyclopropyl-1H-pyrazol-5-yl)pyrimidine-2,4-diamine(Non-covalent)

APJ.1: 16 residues within 4Å: Chain A: L.41, G.42, Y.43, A.61, K.63, L.106, E.107, L.108, C.109, L.111, N.112, D.115, Q.162, L.165, S.188, D.189 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.106, A:L.165 Hydrogen bonds: A:C.109, A:C.109, A:C.109, A:N.112, A:S.188, A:D.189 APJ.2: 16 residues within 4Å: Chain B: L.41, G.42, Y.43, A.61, K.63, L.106, E.107, L.108, C.109, L.111, N.112, D.115, Q.162, L.165, S.188, D.189 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:L.106, B:L.165 Hydrogen bonds: B:C.109, B:C.109, B:C.109, B:N.112, B:S.188, B:D.189

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Korennykh, A.V. et al., The unfolded protein response signals through high-order assembly of Ire1. Nature (2009)

Release Date

2008-12-16

Peptides

Serine/threonine-protein kinase/endoribonuclease IRE1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

Serine/threonine-protein kinase/endoribonuclease IRE1

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