- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.31 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x FE2: FE (II) ION(Non-covalent)
- 8 x CA: CALCIUM ION(Non-covalent)
CA.2: 4 residues within 4Å:- Chain A: H.20, G.22, D.82, D.84
6 PLIP interactions:5 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:H.20, A:G.22, A:D.82, A:D.82, A:D.84, H2O.4
CA.3: 2 residues within 4Å:- Chain A: E.54
- Chain B: N.658
5 PLIP interactions:1 interactions with chain A, 4 Ligand-Water interactions- Metal complexes: A:E.54, H2O.4, H2O.8, H2O.8, H2O.22
CA.20: 2 residues within 4Å:- Chain A: N.658
- Chain B: E.54
5 PLIP interactions:1 interactions with chain B, 4 Ligand-Water interactions- Metal complexes: B:E.54, H2O.1, H2O.8, H2O.21, H2O.21
CA.23: 4 residues within 4Å:- Chain B: H.20, G.22, D.82, D.84
6 PLIP interactions:5 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:H.20, B:G.22, B:D.82, B:D.82, B:D.84, H2O.22
CA.34: 4 residues within 4Å:- Chain C: H.20, G.22, D.82, D.84
6 PLIP interactions:5 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:H.20, C:G.22, C:D.82, C:D.82, C:D.84, H2O.40
CA.35: 2 residues within 4Å:- Chain C: E.54
- Chain D: N.658
5 PLIP interactions:1 interactions with chain C, 4 Ligand-Water interactions- Metal complexes: C:E.54, H2O.33, H2O.35, H2O.35, H2O.51
CA.49: 2 residues within 4Å:- Chain C: N.658
- Chain D: E.54
5 PLIP interactions:1 interactions with chain D, 4 Ligand-Water interactions- Metal complexes: D:E.54, H2O.36, H2O.50, H2O.51, H2O.51
CA.51: 4 residues within 4Å:- Chain D: H.20, G.22, D.82, D.84
6 PLIP interactions:5 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: D:H.20, D:G.22, D:D.82, D:D.82, D:D.84, H2O.51
- 4 x ACD: ARACHIDONIC ACID(Non-covalent)
ACD.4: 4 residues within 4Å:- Chain A: L.393, I.426, D.427, G.430
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:L.393
ACD.24: 7 residues within 4Å:- Chain B: H.392, L.393, I.426, D.427, G.430, R.431, M.456
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:L.393, B:I.426, B:R.431
ACD.36: 7 residues within 4Å:- Chain C: L.388, H.392, L.393, I.426, D.427, G.430, I.696
3 PLIP interactions:3 interactions with chain C- Hydrophobic interactions: C:L.388, C:L.393, C:I.426
ACD.52: 7 residues within 4Å:- Chain D: L.388, H.392, L.393, I.426, D.427, G.430, R.431
2 PLIP interactions:2 interactions with chain D- Hydrophobic interactions: D:L.388, D:L.393
- 21 x ACY: ACETIC ACID(Non-functional Binders)
ACY.5: 6 residues within 4Å:- Chain A: F.235, Q.238, F.239, E.378, H.583, N.589
Ligand excluded by PLIPACY.6: 5 residues within 4Å:- Chain A: H.164, S.178, Y.181, Q.182, I.429
Ligand excluded by PLIPACY.7: 5 residues within 4Å:- Chain A: S.444, Y.584, A.592, A.623, V.627
Ligand excluded by PLIPACY.8: 4 residues within 4Å:- Chain A: N.266, A.267, L.269
- Ligands: GOL.12
Ligand excluded by PLIPACY.9: 4 residues within 4Å:- Chain A: F.633, Y.639, E.688, R.689
Ligand excluded by PLIPACY.10: 7 residues within 4Å:- Chain A: L.192, G.195, S.196, T.199, L.213, S.618, A.621
Ligand excluded by PLIPACY.11: 4 residues within 4Å:- Chain A: L.336, G.337, P.486, G.487
Ligand excluded by PLIPACY.25: 5 residues within 4Å:- Chain B: F.235, Q.238, F.239, E.378, N.589
Ligand excluded by PLIPACY.26: 3 residues within 4Å:- Chain B: Y.639, E.688, R.689
Ligand excluded by PLIPACY.27: 5 residues within 4Å:- Chain B: L.192, G.195, S.196, T.199, A.621
Ligand excluded by PLIPACY.28: 5 residues within 4Å:- Chain B: H.164, D.165, S.178, Q.182, I.429
Ligand excluded by PLIPACY.37: 5 residues within 4Å:- Chain C: F.235, Q.238, F.239, E.378, N.589
Ligand excluded by PLIPACY.38: 5 residues within 4Å:- Chain C: L.192, G.195, S.196, T.199, A.621
Ligand excluded by PLIPACY.39: 7 residues within 4Å:- Chain C: Q.383, S.444, Y.584, A.592, A.623, T.626, V.627
Ligand excluded by PLIPACY.40: 6 residues within 4Å:- Chain C: D.208, H.211, A.226, D.227, W.229, H.230
Ligand excluded by PLIPACY.41: 5 residues within 4Å:- Chain C: H.164, D.165, S.178, Y.181, Q.182
Ligand excluded by PLIPACY.42: 4 residues within 4Å:- Chain C: F.633, Y.639, E.688, R.689
Ligand excluded by PLIPACY.53: 5 residues within 4Å:- Chain D: H.164, S.178, Y.181, Q.182, I.429
Ligand excluded by PLIPACY.54: 5 residues within 4Å:- Chain D: D.208, H.211, A.226, W.229, H.230
Ligand excluded by PLIPACY.55: 6 residues within 4Å:- Chain D: F.235, Q.238, F.239, E.378, H.583, N.589
Ligand excluded by PLIPACY.56: 7 residues within 4Å:- Chain D: L.192, G.195, S.196, T.199, K.617, S.618, A.621
Ligand excluded by PLIP- 19 x GOL: GLYCEROL(Non-functional Binders)
GOL.12: 7 residues within 4Å:- Chain A: N.266, L.269, D.270, R.271, G.272, K.273
- Ligands: ACY.8
Ligand excluded by PLIPGOL.13: 6 residues within 4Å:- Chain A: G.506, I.509, A.510, R.555, E.556, K.559
Ligand excluded by PLIPGOL.14: 6 residues within 4Å:- Chain A: V.291, F.381, N.385, R.390, C.459, E.462
Ligand excluded by PLIPGOL.15: 6 residues within 4Å:- Chain A: E.202, N.203, D.205, S.206, D.209
- Chain D: R.215
Ligand excluded by PLIPGOL.16: 11 residues within 4Å:- Chain A: G.16, D.17, R.18, F.86, N.88, F.106, R.638, S.644, A.645
- Chain B: D.17, G.51
Ligand excluded by PLIPGOL.17: 7 residues within 4Å:- Chain A: D.492, D.493, A.496, I.667, K.670, I.671, R.674
Ligand excluded by PLIPGOL.18: 7 residues within 4Å:- Chain A: D.662, E.665
- Chain B: D.24, A.25, D.44, K.45, G.46
Ligand excluded by PLIPGOL.21: 6 residues within 4Å:- Chain A: D.44, K.45, G.46, S.47
- Chain B: D.662, E.665
Ligand excluded by PLIPGOL.29: 5 residues within 4Å:- Chain B: G.506, A.510, R.555, E.556, K.559
Ligand excluded by PLIPGOL.30: 6 residues within 4Å:- Chain B: N.203, W.204, D.205, S.206, D.209
- Chain C: R.215
Ligand excluded by PLIPGOL.31: 6 residues within 4Å:- Chain B: V.291, F.381, N.385, R.390, C.459, E.462
Ligand excluded by PLIPGOL.43: 6 residues within 4Å:- Chain C: N.266, L.269, D.270, R.271, G.272, K.273
Ligand excluded by PLIPGOL.44: 6 residues within 4Å:- Chain C: G.506, I.509, A.510, R.555, E.556, K.559
Ligand excluded by PLIPGOL.45: 2 residues within 4Å:- Chain C: L.254, S.256
Ligand excluded by PLIPGOL.46: 7 residues within 4Å:- Chain C: D.662, E.665
- Chain D: D.24, A.25, D.44, G.46, F.48
Ligand excluded by PLIPGOL.47: 6 residues within 4Å:- Chain C: E.202, N.203, W.204, D.205, S.206, D.209
Ligand excluded by PLIPGOL.57: 6 residues within 4Å:- Chain C: A.25, D.44, K.45, G.46
- Chain D: D.662, E.665
Ligand excluded by PLIPGOL.58: 6 residues within 4Å:- Chain D: G.506, I.509, A.510, R.555, E.556, K.559
Ligand excluded by PLIPGOL.59: 7 residues within 4Å:- Chain A: R.215
- Chain D: E.202, N.203, W.204, D.205, S.206, D.209
Ligand excluded by PLIP- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.19: 5 residues within 4Å:- Chain A: E.119, A.120, W.648, E.649, D.650
Ligand excluded by PLIPCL.32: 6 residues within 4Å:- Chain B: E.119, A.120, K.414, W.648, E.649, D.650
Ligand excluded by PLIPCL.48: 4 residues within 4Å:- Chain C: T.38, D.39, G.60, F.61
Ligand excluded by PLIPCL.60: 5 residues within 4Å:- Chain D: E.119, A.120, W.648, E.649, D.650
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Neau, D.B. et al., The 1.85 A structure of an 8R-lipoxygenase suggests a general model for lipoxygenase product specificity. Biochemistry (2009)
- Release Date
- 2009-08-18
- Peptides
- Allene oxide synthase-lipoxygenase protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.31 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x FE2: FE (II) ION(Non-covalent)
- 8 x CA: CALCIUM ION(Non-covalent)
- 4 x ACD: ARACHIDONIC ACID(Non-covalent)
- 21 x ACY: ACETIC ACID(Non-functional Binders)
- 19 x GOL: GLYCEROL(Non-functional Binders)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Neau, D.B. et al., The 1.85 A structure of an 8R-lipoxygenase suggests a general model for lipoxygenase product specificity. Biochemistry (2009)
- Release Date
- 2009-08-18
- Peptides
- Allene oxide synthase-lipoxygenase protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D