SMTL ID : 3fh4.1

Crystal Structure of Recombinant Vibrio proteolyticus aminopeptidase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: D.117, E.152, H.256 Ligands: ZN.2, TRS.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.117, A:E.152, A:E.152, A:H.256 ZN.2: 8 residues within 4Å: Chain A: H.97, D.117, D.118, E.151, E.152, D.179 Ligands: ZN.1, TRS.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.97, A:D.117, A:D.179, A:D.179

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.3: 12 residues within 4Å: Chain A: H.97, D.117, E.151, E.152, D.179, M.180, Y.225, C.227, I.255, H.256 Ligands: ZN.1, ZN.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.225, A:Y.225

2 x NA: SODIUM ION(Non-functional Binders)

NA.4: 3 residues within 4Å: Chain A: T.38, Y.73, N.74 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.38, A:N.74 Water bridges: A:N.74 NA.5: 3 residues within 4Å: Chain A: L.213, P.214, S.215 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.215, A:S.215

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hartley, M. et al., Heterologous expression and purification of Vibrio proteolyticus (Aeromonas proteolytica) aminopeptidase: a rapid protocol. Protein Expr.Purif. (2009)

Release Date

2009-11-17

Peptides

Bacterial leucyl aminopeptidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bacterial leucyl aminopeptidase

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