SMTL ID : 3fvd.1

Crystal structure of a member of enolase superfamily from ROSEOVARIUS NUBINHIBENS ISM complexed with magnesium

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-octamer

Ligands

8 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: D.196, N.198, E.220, D.243, E.244 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.220, A:D.243, A:E.244, H2O.1, H2O.12 MG.2: 4 residues within 4Å: Chain B: D.196, E.220, D.243, E.244 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.220, B:D.243, B:E.244, H2O.2, H2O.8 MG.3: 5 residues within 4Å: Chain C: D.196, N.198, E.220, D.243, E.244 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:E.220, C:D.243, C:E.244, H2O.14, H2O.25 MG.4: 4 residues within 4Å: Chain D: D.196, E.220, D.243, E.244 5 PLIP interactions: 3 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:E.220, D:D.243, D:E.244, H2O.15, H2O.21 MG.5: 5 residues within 4Å: Chain E: D.196, N.198, E.220, D.243, E.244 5 PLIP interactions: 3 interactions with chain E, 2 Ligand-Water interactions Metal complexes: E:E.220, E:D.243, E:E.244, H2O.27, H2O.38 MG.6: 4 residues within 4Å: Chain F: D.196, E.220, D.243, E.244 5 PLIP interactions: 3 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:E.220, F:D.243, F:E.244, H2O.28, H2O.35 MG.7: 5 residues within 4Å: Chain G: D.196, N.198, E.220, D.243, E.244 5 PLIP interactions: 3 interactions with chain G, 2 Ligand-Water interactions Metal complexes: G:E.220, G:D.243, G:E.244, H2O.40, H2O.51 MG.8: 4 residues within 4Å: Chain H: D.196, E.220, D.243, E.244 5 PLIP interactions: 3 interactions with chain H, 2 Ligand-Water interactions Metal complexes: H:E.220, H:D.243, H:E.244, H2O.41, H2O.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Malashkevich, V.N. et al., Crystal structure of a member of enolase superfamily from ROSEOVARIUS NUBINHIBENS ISM complexed with magnesium. to be published

Release Date

2009-01-27

Peptides

Mandelate racemase/muconate lactonizing enzyme: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

C
B

D
A

E
B

F
A

G
B

H
A

Mandelate racemase/muconate lactonizing enzyme

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