SMTL ID : 3g3x.1

Crystal structure of spin labeled T4 Lysozyme (T151R1) at 100 K

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x MTN: S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate(Non-covalent)

MTN.1: 2 residues within 4Å: Chain A: C.151, T.155 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:T.155

1 x HED: 2-HYDROXYETHYL DISULFIDE(Non-covalent)

HED.2: 3 residues within 4Å: Chain A: F.4, N.68, D.72 No protein-ligand interaction detected (PLIP)

2 x AZI: AZIDE ION(Non-covalent)

AZI.3: 4 residues within 4Å: Chain A: R.125, W.126, D.127, E.128 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.125, A:D.127, A:E.128, A:E.128 Water bridges: A:W.126 AZI.4: 3 residues within 4Å: Chain A: R.14, L.15, K.16 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.15, A:K.16

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 4 residues within 4Å: Chain A: T.142, P.143, N.144, R.145 Ligand excluded by PLIP CL.6: 2 residues within 4Å: Chain A: E.11, Y.18 Ligand excluded by PLIP CL.7: 2 residues within 4Å: Chain A: K.135, S.136 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fleissner, M.R. et al., Structural origin of weakly ordered nitroxide motion in spin-labeled proteins. Protein Sci. (2009)

Release Date

2009-05-05

Peptides

Lysozyme: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Lysozyme

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