SMTL ID : 3g5q.1

Crystal structure of Thermus thermophilus TrmFO

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 30 residues within 4Å: Chain A: G.8, A.9, G.10, L.11, A.12, E.31, M.32, R.33, T.38, H.41, V.50, C.51, S.52, E.119, E.120, V.121, A.132, T.133, G.134, P.135, L.136, T.137, S.138, L.141, G.335, V.336, E.341, G.342, Y.343, S.346 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:V.50, A:P.135 Hydrogen bonds: A:L.11, A:A.12, A:M.32, A:R.33, A:R.33, A:S.52, A:V.121, A:V.121, A:S.138, A:V.336, A:G.342, A:Y.343, A:Y.343, A:S.346 Water bridges: A:G.10, A:G.13, A:H.41, A:S.52, A:S.54, A:L.337 Salt bridges: A:H.41 pi-Stacking: A:Y.343

1 x MRD: (4R)-2-METHYLPENTANE-2,4-DIOL(Non-functional Binders)

MRD.2: 6 residues within 4Å: Chain A: D.185, Q.264, E.265, D.266, T.384, N.386 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:N.386 Hydrogen bonds: A:N.386

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nishimasu, H. et al., Atomic structure of a folate/FAD-dependent tRNA T54 methyltransferase. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2009-05-19

Peptides

Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO

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