- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.50 Å
- Oligo State
- hetero-1-3-1-1-mer
- Ligands
- 3 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 3 x BEF: BERYLLIUM TRIFLUORIDE ION(Non-covalent)
BEF.2: 11 residues within 4Å:- Chain B: R.69, G.70, K.73, E.149, T.179, R.237
- Chain C: E.166, T.187, R.191
- Ligands: ADP.1, MG.3
No protein-ligand interaction detected (PLIP)BEF.6: 11 residues within 4Å:- Chain C: R.69, G.70, K.73, T.74, E.149, T.179, R.237
- Chain D: T.187, R.191
- Ligands: ADP.5, MG.7
No protein-ligand interaction detected (PLIP)BEF.10: 10 residues within 4Å:- Chain D: R.69, G.70, K.73, E.149, T.179, R.237
- Chain E: T.154, R.158
- Ligands: ADP.9, MG.11
No protein-ligand interaction detected (PLIP)- 3 x MG: MAGNESIUM ION(Non-covalent)
MG.3: 6 residues within 4Å:- Chain B: T.74, D.148, E.149
- Chain C: E.166
- Ligands: ADP.1, BEF.2
2 PLIP interactions:2 interactions with chain B- Metal complexes: B:T.74, B:E.149
MG.7: 7 residues within 4Å:- Chain C: T.74, D.148, E.149
- Chain D: E.166, R.191
- Ligands: ADP.5, BEF.6
1 PLIP interactions:1 interactions with chain C- Metal complexes: C:T.74
MG.11: 7 residues within 4Å:- Chain D: T.74, D.148, E.149
- Chain E: E.133, R.158
- Ligands: ADP.9, BEF.10
1 PLIP interactions:1 interactions with chain D- Metal complexes: D:T.74
- 4 x ZN: ZINC ION(Non-covalent)
ZN.4: 5 residues within 4Å:- Chain B: C.86, C.95, G.96, C.98, C.101
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:C.86, B:C.95, B:C.98, B:C.101
ZN.8: 6 residues within 4Å:- Chain C: C.86, E.87, C.95, G.96, C.98, C.101
4 PLIP interactions:4 interactions with chain C- Metal complexes: C:C.86, C:C.95, C:C.98, C:C.101
ZN.12: 6 residues within 4Å:- Chain D: C.86, E.87, C.95, G.96, C.98, C.101
4 PLIP interactions:4 interactions with chain D- Metal complexes: D:C.86, D:C.95, D:C.98, D:C.101
ZN.13: 4 residues within 4Å:- Chain E: C.50, C.59, C.62, C.65
4 PLIP interactions:4 interactions with chain E- Metal complexes: E:C.50, E:C.59, E:C.62, E:C.65
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Simonetta, K.R. et al., The mechanism of ATP-dependent primer-template recognition by a clamp loader complex. Cell(Cambridge,Mass.) (2009)
- Release Date
- 2009-05-26
- Peptides
- DNA polymerase III subunit delta: A
DNA polymerase III subunit tau: BCD
DNA polymerase III subunit delta': E
DNA polymerase III subunit psi: H - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
FB
GC
HD
IE
JH
P
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.50 Å
- Oligo State
- hetero-1-3-1-1-mer
- Ligands
- 3 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 3 x BEF: BERYLLIUM TRIFLUORIDE ION(Non-covalent)
- 3 x MG: MAGNESIUM ION(Non-covalent)
- 4 x ZN: ZINC ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Simonetta, K.R. et al., The mechanism of ATP-dependent primer-template recognition by a clamp loader complex. Cell(Cambridge,Mass.) (2009)
- Release Date
- 2009-05-26
- Peptides
- DNA polymerase III subunit delta: A
DNA polymerase III subunit tau: BCD
DNA polymerase III subunit delta': E
DNA polymerase III subunit psi: H - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
FB
GC
HD
IE
JH
P