SMTL ID : 3glu.1

Crystal Structure of Human SIRT3 with AceCS2 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-2-2-mer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: R.270 2 PLIP interactions: 2 interactions with chain A Water bridges: A:R.270 Salt bridges: A:R.270 SO4.2: 6 residues within 4Å: Chain A: G.31, A.32, Q.114, T.206, S.207, V.210 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.32, A:T.206, A:S.207 SO4.4: 1 residues within 4Å: Chain C: R.270 2 PLIP interactions: 2 interactions with chain C Water bridges: C:R.270 Salt bridges: C:R.270 SO4.5: 6 residues within 4Å: Chain C: G.31, A.32, Q.114, T.206, S.207, V.210 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:A.32, C:S.207

2 x ZN: ZINC ION(Non-covalent)

ZN.3: 4 residues within 4Å: Chain A: C.142, C.145, C.166, C.169 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.142, A:C.145, A:C.166, A:C.169 ZN.6: 4 residues within 4Å: Chain C: C.142, C.145, C.166, C.169 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.142, C:C.145, C:C.166, C:C.169

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jin, L. et al., Crystal Structures of Human SIRT3 Displaying Substrate-induced Conformational Changes. J.Biol.Chem. (2009)

Release Date

2009-06-16

Peptides

NAD-dependent deacetylase sirtuin-3, mitochondrial: AC
Acetyl-coenzyme A synthetase 2-like, mitochondrial: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
B

D
B

NAD-dependent deacetylase sirtuin-3, mitochondrial

Acetyl-coenzyme A synthetase 2-like, mitochondrial

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