SMTL ID : 3gok.3 (16 other biounits)

Binding site mapping of protein ligands

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-trimer

Ligands

3 x P4O: 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,5,6,7-TETRAHYDRO-4H-PYRROLO[3,2-C]PYRIDIN-4-ONE(Non-covalent)

P4O.1: 15 residues within 4Å: Chain A: L.40, L.42, G.43, V.48, A.61, K.63, M.108, E.109, C.110, L.111, D.112, N.161, L.163, T.176, D.177 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.40, A:V.48, A:L.163 Hydrogen bonds: A:K.63, A:L.111, A:N.161, A:D.177 P4O.2: 15 residues within 4Å: Chain B: L.40, L.42, G.43, V.48, A.61, K.63, M.108, E.109, C.110, L.111, D.112, N.161, L.163, T.176, D.177 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:L.40, B:L.40, B:V.48, B:A.61, B:D.112, B:L.163 Hydrogen bonds: B:L.111, B:D.177 P4O.3: 15 residues within 4Å: Chain C: L.40, L.42, G.43, V.48, A.61, K.63, M.108, E.109, C.110, L.111, D.112, N.161, L.163, T.176, D.177 10 PLIP interactions: 10 interactions with chain C Hydrophobic interactions: C:L.40, C:L.40, C:V.48, C:A.61, C:D.112, C:L.163 Hydrogen bonds: C:K.63, C:K.63, C:L.111, C:D.177

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scheich, C. et al., Binding site mapping of protein ligands. To be published

Release Date

2010-03-02

Peptides

MAP kinase-activated protein kinase 2: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
F

MAP kinase-activated protein kinase 2

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