SMTL ID : 3gwx.1

MOLECULAR RECOGNITION OF FATTY ACIDS BY PEROXISOME PROLIFERATOR-ACTIVATED RECEPTORS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x EPA: 5,8,11,14,17-EICOSAPENTAENOIC ACID(Non-covalent)

EPA.1: 12 residues within 4Å: Chain A: C.79, T.82, T.83, T.86, H.117, I.120, M.123, L.124, I.158, H.243, L.263, Y.267 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:T.82, A:I.120, A:M.123, A:I.158 Hydrogen bonds: A:T.83, A:Y.267 Salt bridges: A:H.117, A:H.243 EPA.2: 16 residues within 4Å: Chain B: C.79, Q.80, T.82, T.83, T.86, E.89, H.117, I.120, F.121, M.123, I.127, I.157, I.158, H.243, L.263, Y.267 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:T.82, B:T.83, B:I.120, B:F.121, B:M.123, B:I.127 Hydrogen bonds: B:Y.267 Salt bridges: B:H.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, H.E. et al., Molecular recognition of fatty acids by peroxisome proliferator-activated receptors. Mol.Cell (1999)

Release Date

2000-04-26

Peptides

PROTEIN (PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR (PPAR-DELTA)): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PROTEIN (PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR (PPAR-DELTA))

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