SMTL ID : 3hhl.1 (1 other biounit)

Crystal structure of methylated RPA0582 protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: R.106 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.106 SO4.2: 1 residues within 4Å: Chain A: D.20 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.20

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 5 residues within 4Å: Chain A: M.27, N.29, A.93, Y.95 Ligands: 2PE.6 Ligand excluded by PLIP CL.9: 5 residues within 4Å: Chain B: M.27, N.29, A.93, Y.95 Ligands: 2PE.12 Ligand excluded by PLIP

3 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.4: 1 residues within 4Å: Chain A: E.22 No protein-ligand interaction detected (PLIP) PEG.7: 2 residues within 4Å: Chain A: L.132, K.133 No protein-ligand interaction detected (PLIP) PEG.11: 3 residues within 4Å: Chain B: L.132, K.133, P.134 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.133

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.5: 1 residues within 4Å: Chain A: E.76 No protein-ligand interaction detected (PLIP)

2 x 2PE: NONAETHYLENE GLYCOL(Non-covalent)

2PE.6: 18 residues within 4Å: Chain A: D.7, P.8, N.29, Y.54, S.58, S.62, E.63, G.67, V.69, Y.95, I.105, Y.110, R.111, V.114, R.117, L.126 Chain B: I.80 Ligands: CL.3 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Y.54, A:S.58, A:G.59, A:S.62, A:Y.95, A:Y.110 Water bridges: A:R.117 2PE.12: 15 residues within 4Å: Chain B: D.7, P.8, N.29, Y.54, S.58, G.59, S.62, G.67, K.68, V.69, Y.110, R.117, Q.118, L.126 Ligands: CL.9 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:D.7, B:S.58, B:G.59, B:S.62, B:Y.95, B:Y.110 Water bridges: B:V.69

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.8: 3 residues within 4Å: Chain A: T.3, G.4, H.5 1 PLIP interactions: 1 interactions with chain A Water bridges: A:H.5 GOL.13: 3 residues within 4Å: Chain B: T.3, G.4, H.5 No protein-ligand interaction detected (PLIP)

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.10: 6 residues within 4Å: Chain A: K.68, V.70 Chain B: K.68, V.70, W.71, E.94 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sledz, P. et al., Crystal structure of methylated RPA0582 protein. To be Published

Release Date

2009-07-07

Peptides

RPA0582: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

RPA0582

Related Entries With Identical Sequence