SMTL ID : 3hhl.2 (1 other biounit)

Crystal structure of methylated RPA0582 protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

homo-dimer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 6 residues within 4Å: Chain A: M.27, N.29, A.93, Y.95, L.126 Ligands: PE8.6 Ligand excluded by PLIP CL.10: 6 residues within 4Å: Chain B: M.27, N.29, A.93, Y.95, L.126 Ligands: PE8.14 Ligand excluded by PLIP

4 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 2 residues within 4Å: Chain A: R.34, A.38 No protein-ligand interaction detected (PLIP) PEG.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) PEG.4: 1 residues within 4Å: Chain A: E.22 No protein-ligand interaction detected (PLIP) PEG.12: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.5: 3 residues within 4Å: Chain A: E.76, L.77 Chain B: Q.15 No protein-ligand interaction detected (PLIP) PGE.13: 2 residues within 4Å: Chain A: Q.15 Chain B: E.76 No protein-ligand interaction detected (PLIP)

2 x PE8: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL(Non-covalent)

PE8.6: 17 residues within 4Å: Chain A: D.7, P.8, N.29, Y.54, S.58, S.62, G.67, K.68, V.69, Y.95, I.105, Y.110, V.114, R.117, L.126 Chain B: I.80 Ligands: CL.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.58, A:S.62, A:Y.95 Water bridges: A:R.117 PE8.14: 16 residues within 4Å: Chain A: I.80 Chain B: D.7, P.8, N.29, Y.54, S.62, G.67, K.68, V.69, Y.95, I.105, Y.110, R.111, V.114, L.126 Ligands: CL.10 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:Y.54, B:S.62, B:G.67, B:Y.95, B:Y.110, B:R.111

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.7: 3 residues within 4Å: Chain A: T.3, G.4, H.5 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.4 GOL.15: 3 residues within 4Å: Chain B: T.3, G.4, H.5 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:T.3

1 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)

1PE.8: 2 residues within 4Å: Chain A: E.63, R.64 1 PLIP interactions: 1 interactions with chain A Water bridges: A:R.64

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.9: 1 residues within 4Å: Chain B: R.106 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.106

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.11: 6 residues within 4Å: Chain A: V.70, W.71 Chain B: K.68, V.70, W.71, E.94 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sledz, P. et al., Crystal structure of methylated RPA0582 protein. To be Published

Release Date

2009-07-07

Peptides

RPA0582: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

RPA0582

Related Entries With Identical Sequence