SMTL ID : 3hm6.1

Crystal structure of the cytoplasmic domain of human plexin B1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

19 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.1: 4 residues within 4Å: Chain A: E.133, T.190, V.191, V.192 Ligand excluded by PLIP UNX.2: 4 residues within 4Å: Chain A: F.86, P.87, G.88, H.89 Ligand excluded by PLIP UNX.3: 2 residues within 4Å: Chain A: N.577, L.580 Ligand excluded by PLIP UNX.4: 3 residues within 4Å: Chain A: R.187, T.188 Ligands: UNX.5 Ligand excluded by PLIP UNX.5: 3 residues within 4Å: Chain A: R.187, T.188 Ligands: UNX.4 Ligand excluded by PLIP UNX.6: 1 residues within 4Å: Chain A: K.290 Ligand excluded by PLIP UNX.7: 3 residues within 4Å: Chain A: N.501, F.504 Ligands: UNX.8 Ligand excluded by PLIP UNX.8: 5 residues within 4Å: Chain A: P.87, N.497, N.501, F.504 Ligands: UNX.7 Ligand excluded by PLIP UNX.9: 2 residues within 4Å: Chain A: Q.503, T.510 Ligand excluded by PLIP UNX.10: 4 residues within 4Å: Chain A: N.244, A.516, L.519, V.520 Ligand excluded by PLIP UNX.11: 2 residues within 4Å: Chain A: D.564, T.568 Ligand excluded by PLIP UNX.12: 3 residues within 4Å: Chain A: L.583, N.586, Y.587 Ligand excluded by PLIP UNX.13: 1 residues within 4Å: Chain A: D.590 Ligand excluded by PLIP UNX.14: 1 residues within 4Å: Chain A: K.602 Ligand excluded by PLIP UNX.15: 3 residues within 4Å: Chain A: N.605, Y.608, D.609 Ligand excluded by PLIP UNX.16: 4 residues within 4Å: Chain A: D.76, Y.77, K.78, S.588 Ligand excluded by PLIP UNX.17: 1 residues within 4Å: Chain A: R.141 Ligand excluded by PLIP UNX.18: 4 residues within 4Å: Chain A: P.215, M.218, F.441, D.444 Ligand excluded by PLIP UNX.19: 1 residues within 4Å: Chain A: P.455 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tong, Y. et al., Structure and function of the intracellular region of the plexin-b1 transmembrane receptor. J.Biol.Chem. (2009)

Release Date

2009-06-09

Peptides

Plexin-B1: A
Unknown peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

B
C

Plexin-B1

Unknown peptide

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