SMTL ID : 3hqr.1

PHD2:Mn:NOG:HIF1-alpha substrate complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: H.133, D.135, H.194 Ligands: OGA.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.133, A:D.135, A:H.194, H2O.1

1 x OGA: N-OXALYLGLYCINE(Non-covalent)

OGA.2: 14 residues within 4Å: Chain A: R.72, M.119, Y.130, H.133, D.135, I.147, Y.149, L.163, H.194, V.196, R.203, A.205 Chain B: P.7 Ligands: MN.1 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:Y.123, A:Y.149 Water bridges: A:R.72, A:T.207, A:T.207, A:T.207, A:T.207 Salt bridges: A:R.72, A:H.133, A:R.203

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chowdhury, R. et al., Structural basis for binding of hypoxia-inducible factor to the oxygen-sensing prolyl hydroxylases. Structure (2009)

Release Date

2009-07-28

Peptides

Egl nine homolog 1: A
Hypoxia-inducible factor 1 alpha: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
S

Egl nine homolog 1

Hypoxia-inducible factor 1 alpha

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