SMTL ID : 3hu9.1

Nitrosobenzene in complex with T4 lysozyme L99A/M102Q

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.46 Å

Oligo State

monomer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 4 residues within 4Å: Chain A: R.125, W.126, D.127, E.128 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.125, A:W.126, A:D.127, A:E.128

1 x NBE: NITROSOBENZENE(Non-covalent)

NBE.2: 10 residues within 4Å: Chain A: L.84, V.87, Y.88, A.99, Q.102, V.103, V.111, L.118, L.121, F.153 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.84, A:L.84, A:V.87, A:A.99, A:V.103, A:V.111, A:L.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boyce, S.E. et al., Predicting ligand binding affinity with alchemical free energy methods in a polar model binding site. J.Mol.Biol. (2009)

Release Date

2009-11-03

Peptides

Lysozyme: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Lysozyme

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