SMTL ID : 3im0.1

Crystal structure of Chlorella virus vAL-1 soaked in 200mM D-glucuronic acid, 10% PEG-3350, and 200mM glycine-NaOH (pH 10.0)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.66 Å

Oligo State

monomer

Ligands

1 x BDP: beta-D-glucopyranuronic acid(Non-covalent)

BDP.1: 12 residues within 4Å: Chain A: T.50, K.92, S.104, G.105, Y.106, R.116, Y.128, Y.130, H.147, F.220, G.222, G.223 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:K.92, A:S.104, A:G.105, A:Y.106, A:R.116, A:R.116, A:Y.128, A:G.223 Water bridges: A:Y.106, A:N.218 Salt bridges: A:R.116

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ogura, K. et al., Crystal structure of family 14 polysaccharide lyase with pH-dependent modes of action. J.Biol.Chem. (2009)

Release Date

2009-10-20

Peptides

VAL-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

VAL-1

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