SMTL ID : 3ipp.1 (1 other biounit)

crystal structure of sulfur-free YnjE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 7 residues within 4Å: Chain A: Y.307, C.366, G.367, T.368, G.369, W.370, R.371 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Y.307, A:G.367, A:T.368, A:T.368, A:G.369, A:W.370, A:R.371 Salt bridges: A:R.371 PO4.2: 8 residues within 4Å: Chain A: E.153, A.155, A.158, K.160, L.161, Y.162, Y.172, R.212 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:E.153, A:E.153, A:K.160, A:L.161, A:Y.162, A:Y.172 Salt bridges: A:K.160

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: W.297, W.321, G.325, S.326, D.333 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:W.297 GOL.4: 5 residues within 4Å: Chain A: Q.71, H.323, D.333, R.342, M.350 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.71, A:H.323, A:D.333, A:R.342, A:R.342

1 x NA: SODIUM ION(Non-functional Binders)

NA.5: 7 residues within 4Å: Chain A: L.183, W.184, N.185, R.219, T.368, D.391, G.392 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.219, A:D.391

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hanzelmann, P. et al., Crystal structure of YnjE from Escherichia coli, a sulfurtransferase with three rhodanese domains. Protein Sci. (2009)

Release Date

2009-12-08

Peptides

Putative thiosulfate sulfurtransferase ynjE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative thiosulfate sulfurtransferase ynjE

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