SMTL ID : 3jzf.1

Crystal structure of biotin carboxylase from E. Coli in complex with benzimidazoles series

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.13 Å

Oligo State

homo-dimer

Ligands

1 x CO3: CARBONATE ION(Non-functional Binders)

CO3.1: 7 residues within 4Å: Chain A: K.259, N.311, R.313, Q.315, V.316, E.317, R.359 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.313, A:R.313, A:V.316, A:E.317

1 x JZK: 2-[(2-chlorobenzyl)amino]-1-(cyclohexylmethyl)-1H-benzimidazole-5-carboxamide(Non-covalent)

JZK.2: 22 residues within 4Å: Chain B: K.137, V.152, I.178, K.180, A.181, G.184, G.185, G.186, G.187, R.188, G.189, M.190, Y.220, E.222, K.223, Y.224, L.225, H.230, H.257, L.299, I.308, E.309 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:K.137, B:K.180, B:H.230, B:L.299, B:L.299, B:I.308 Hydrogen bonds: B:K.180, B:G.187, B:E.222, B:L.225 Halogen bonds: B:I.308

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cheng, C.C. et al., Discovery and optimization of antibacterial AccC inhibitors. Bioorg.Med.Chem.Lett. (2009)

Release Date

2009-11-03

Peptides

Biotin carboxylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Biotin carboxylase

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