SMTL ID : 3k31.2 (1 other biounit)

Crystal structure of eonyl-(acyl-carrier-protein) reductase from anaplasma phagocytophilum in complex with nad at 1.9a resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-tetramer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 9 residues within 4Å: Chain A: G.37, L.64, C.87, D.88, V.89, S.90, A.115, V.116, A.117 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.37, A:D.88, A:D.88, A:V.89, A:S.90, A:A.117 Water bridges: A:A.39 NAD.7: 9 residues within 4Å: Chain C: G.37, L.64, C.87, D.88, V.89, S.90, A.115, V.116, A.117 7 PLIP interactions: 7 interactions with chain C Hydrogen bonds: C:G.37, C:D.88, C:D.88, C:V.89, C:S.90, C:A.117 Water bridges: C:A.39

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: V.89, A.92, H.141, Y.145, S.146, Y.149 1 PLIP interactions: 1 interactions with chain A Water bridges: A:A.92 EDO.3: 2 residues within 4Å: Chain A: Y.169, Y.179 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Y.179 EDO.5: 6 residues within 4Å: Chain B: V.89, S.90, A.92, H.141, Y.145, S.146 No protein-ligand interaction detected (PLIP) EDO.8: 6 residues within 4Å: Chain C: V.89, A.92, H.141, Y.145, S.146, Y.149 1 PLIP interactions: 1 interactions with chain C Water bridges: C:A.92 EDO.9: 2 residues within 4Å: Chain C: Y.169, Y.179 1 PLIP interactions: 1 interactions with chain C Water bridges: C:Y.179 EDO.11: 6 residues within 4Å: Chain D: V.89, S.90, A.92, H.141, Y.145, S.146 No protein-ligand interaction detected (PLIP)

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 6 residues within 4Å: Chain A: R.127, Y.128, V.175, N.180 Chain B: V.198, D.199 5 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B, 1 interactions with chain D Hydrogen bonds: A:Y.128, A:N.180, B:D.199 Water bridges: A:N.180, D:S.281 GOL.6: 9 residues within 4Å: Chain A: V.198, D.199 Chain B: G.126, R.127, Y.128, V.175, P.177, H.178, N.180 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:Y.128, B:H.178, B:H.178, B:N.180, A:D.199 GOL.10: 6 residues within 4Å: Chain C: R.127, Y.128, V.175, N.180 Chain D: V.198, D.199 5 PLIP interactions: 3 interactions with chain C, 1 interactions with chain B, 1 interactions with chain D Hydrogen bonds: C:Y.128, C:N.180, D:D.199 Water bridges: C:N.180, B:S.281 GOL.12: 9 residues within 4Å: Chain C: V.198, D.199 Chain D: G.126, R.127, Y.128, V.175, P.177, H.178, N.180 5 PLIP interactions: 4 interactions with chain D, 1 interactions with chain C Hydrogen bonds: D:Y.128, D:H.178, D:H.178, D:N.180, C:D.199

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

SSGCID et al., Crystal structure of eonyl-(acyl-carrier-protein) reductase from anaplasma phagocytophilum in complex with nad at 1.9a resolution. to be published

Release Date

2009-10-20

Peptides

Enoyl-(Acyl-carrier-protein) reductase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Enoyl-(Acyl-carrier-protein) reductase

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