- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.75 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Covalent)
- 4 x SHG: 2-deoxy-2-fluoro-beta-D-glucopyranose(Non-covalent)
SHG.2: 13 residues within 4Å:- Chain A: T.169, L.361, Q.448, H.450, D.452, N.454, R.472, F.474, L.545, V.546, H.548, N.593
- Ligands: FAD.1
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:Q.448, A:D.452, A:N.454, A:L.545, A:H.548, A:N.593
- Salt bridges: A:H.450, A:R.472
SHG.5: 11 residues within 4Å:- Chain B: T.169, Q.448, H.450, D.452, N.454, R.472, F.474, V.546, H.548, N.593
- Ligands: FAD.4
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:Q.448, B:D.452, B:N.454, B:H.548, B:N.593
- Water bridges: B:R.472
- Salt bridges: B:H.450, B:R.472
SHG.9: 13 residues within 4Å:- Chain C: T.169, L.361, Q.448, H.450, D.452, N.454, R.472, F.474, L.545, V.546, H.548, N.593
- Ligands: FAD.8
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:Q.448, C:N.454, C:L.545, C:H.548, C:N.593
- Salt bridges: C:H.450, C:R.472
SHG.12: 11 residues within 4Å:- Chain D: T.169, Q.448, H.450, D.452, N.454, R.472, F.474, V.546, H.548, N.593
- Ligands: FAD.11
8 PLIP interactions:8 interactions with chain D- Hydrogen bonds: D:T.169, D:Q.448, D:N.454, D:H.548, D:N.593
- Water bridges: D:R.472
- Salt bridges: D:H.450, D:R.472
- 6 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
MES.3: 14 residues within 4Å:- Chain A: L.121, V.122, V.123, W.131, Q.132, A.133, T.135, F.137, R.139
- Chain B: S.462, I.463, D.464, L.467
- Chain C: L.149
6 PLIP interactions:5 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:V.123, A:Q.132, A:Q.132, A:A.133, B:D.464
- Salt bridges: A:R.139
MES.6: 14 residues within 4Å:- Chain A: S.462, I.463, D.464, L.467
- Chain B: L.121, V.122, V.123, W.131, Q.132, A.133, T.135, F.137, R.139
- Chain D: L.149
6 PLIP interactions:5 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:V.123, B:Q.132, B:Q.132, B:A.133, A:D.464
- Salt bridges: B:R.139
MES.7: 7 residues within 4Å:- Chain B: G.398, A.399, N.402, K.403, H.404, P.405, D.406
No protein-ligand interaction detected (PLIP)MES.10: 14 residues within 4Å:- Chain A: L.149
- Chain C: L.121, V.122, V.123, W.131, Q.132, A.133, T.135, F.137, R.139
- Chain D: S.462, I.463, D.464, L.467
6 PLIP interactions:5 interactions with chain C, 1 interactions with chain D- Hydrogen bonds: C:V.123, C:Q.132, C:Q.132, C:A.133, D:D.464
- Salt bridges: C:R.139
MES.13: 14 residues within 4Å:- Chain B: L.149
- Chain C: S.462, I.463, D.464, L.467
- Chain D: L.121, V.122, V.123, W.131, Q.132, A.133, T.135, F.137, R.139
6 PLIP interactions:5 interactions with chain D, 1 interactions with chain C- Hydrogen bonds: D:V.123, D:Q.132, D:Q.132, D:A.133, C:D.464
- Salt bridges: D:R.139
MES.14: 7 residues within 4Å:- Chain D: G.398, A.399, N.402, K.403, H.404, P.405, D.406
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Spadiut, O. et al., Importance of the gating segment in the substrate-recognition loop of pyranose 2-oxidase. Febs J. (2010)
- Release Date
- 2010-05-12
- Peptides
- Pyranose 2-oxidase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.75 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Covalent)
- 4 x SHG: 2-deoxy-2-fluoro-beta-D-glucopyranose(Non-covalent)
- 6 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Spadiut, O. et al., Importance of the gating segment in the substrate-recognition loop of pyranose 2-oxidase. Febs J. (2010)
- Release Date
- 2010-05-12
- Peptides
- Pyranose 2-oxidase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B