SMTL ID : 3ke4.1

Crystal structure of a PduO-Type ATP:Cob(I)alamin adenosyltransferase from Bacillus cereus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-trimer

Ligands

8 x DIO: 1,4-DIETHYLENE DIOXIDE(Non-covalent)

DIO.1: 5 residues within 4Å: Chain A: Y.50, F.87, G.90, G.91 Ligands: DIO.2 1 PLIP interactions: 1 interactions with chain A Water bridges: A:D.54 DIO.2: 5 residues within 4Å: Chain A: S.34, V.35, Y.50, A.94 Ligands: DIO.1 No protein-ligand interaction detected (PLIP) DIO.3: 4 residues within 4Å: Chain A: F.129, F.180 Chain B: D.54, F.87 No protein-ligand interaction detected (PLIP) DIO.4: 7 residues within 4Å: Chain B: I.130, P.132, R.145, F.180 Chain C: D.54, F.87 Ligands: DIO.5 1 PLIP interactions: 1 interactions with chain B Water bridges: B:R.145 DIO.5: 7 residues within 4Å: Chain B: L.126, R.128, F.129, I.130, F.180 Ligands: DIO.4, DIO.6 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:I.130 DIO.6: 5 residues within 4Å: Chain B: L.126, E.127, R.128, F.129 Ligands: DIO.5 No protein-ligand interaction detected (PLIP) DIO.7: 8 residues within 4Å: Chain A: H.59, I.143 Chain B: H.59, Y.62, T.140, I.143 Chain C: H.59, Y.62 No protein-ligand interaction detected (PLIP) DIO.8: 4 residues within 4Å: Chain C: L.126, E.127, R.128, F.129 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Park, A.K. et al., Crystal structure of a PduO-Type ATP:Cob(I)alamin adenosyltransferase from Bacillus cereus. To be Published

Release Date

2010-10-20

Peptides

Hypothetical Cytosolic Protein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Hypothetical Cytosolic Protein

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