SMTL ID : 3khv.1

Crystal Structures of Urokinase-type Plasminogen Activator in Complex with 4-(Aminomethyl) Benzoic Acid and 4-(Aminomethyl-phenyl)-methanol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

1 x 4AL: [4-(aminomethyl)phenyl]methanol(Non-covalent)

4AL.1: 11 residues within 4Å: Chain A: D.192, S.193, C.194, Q.195, S.198, V.216, W.218, G.219, G.221, G.229 Ligands: SO4.2 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.216 Hydrogen bonds: A:D.192

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: H.46, Q.195, G.196, S.198 Ligands: 4AL.1 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.196, A:S.198, A:S.198, A:S.198 Water bridges: A:H.46 Salt bridges: A:H.46

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.3: 9 residues within 4Å: Chain A: G.132, K.160, L.161, I.162, E.166, A.185, D.186, P.187, W.189 1 PLIP interactions: 1 interactions with chain A Water bridges: A:P.187

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jiang, L.-G. et al., Crystal Structures of Urokinase-type Plasminogen Activator in Complex with 4-(Aminomethyl) Benzoic Acid and 4-(Aminomethyl-phenyl)-methanol. CHIN.J.STRUCT.CHEM. (2009)

Release Date

2009-12-01

Peptides

Urokinase-type plasminogen activator: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Urokinase-type plasminogen activator

Related Entries With Identical Sequence