SMTL ID : 3kjd.1 (1 other biounit)

Human poly(ADP-ribose) polymerase 2, catalytic fragment in complex with an inhibitor ABT-888

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x 78P: (2R)-2-(7-carbamoyl-1H-benzimidazol-2-yl)-2-methylpyrrolidinium(Non-covalent)

78P.1: 8 residues within 4Å: Chain A: H.217, G.218, Y.251, F.252, K.258, S.259, Y.262, E.347 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Y.251, A:Y.251, A:Y.251, A:Y.262, A:E.347 Hydrogen bonds: A:G.218, A:G.218 Water bridges: A:G.218 pi-Stacking: A:Y.262

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: D.185, Y.186, A.260, N.261, C.263, F.264, A.265, F.366 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.185, A:N.261, A:C.263, A:F.264, A:A.265

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karlberg, T. et al., Crystal structure of the catalytic domain of human PARP2 in complex with PARP inhibitor ABT-888. Biochemistry (2010)

Release Date

2009-11-17

Peptides

Poly [ADP-ribose] polymerase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Poly [ADP-ribose] polymerase 2

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