SMTL ID : 4pjv.1 (1 other biounit)

Structure of PARP2 catalytic domain bound to inhibitor BMN 673

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x 2YQ: (8S,9R)-5-fluoro-8-(4-fluorophenyl)-9-(1-methyl-1H-1,2,4-triazol-5-yl)-2,7,8,9-tetrahydro-3H-pyrido[4,3,2-de]phthalazin-3-one(Non-covalent)

2YQ.1: 15 residues within 4Å: Chain A: S.117, Q.121, E.124, H.217, G.218, G.243, Y.244, Y.251, F.252, A.253, K.258, S.259, Y.262, E.347 Ligands: GOL.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Y.244, A:Y.262 Hydrogen bonds: A:G.218, A:G.218 Water bridges: A:E.347 pi-Stacking: A:Y.262

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 9 residues within 4Å: Chain A: E.124, D.128, H.217, S.219, I.227, G.231, L.232, R.233 Ligands: 2YQ.1 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:E.124, A:D.128, A:G.231, A:R.233 Water bridges: A:G.218, A:S.219, A:R.233 GOL.3: 7 residues within 4Å: Chain A: D.185, Y.186, A.260, N.261, C.263, F.264, A.265 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.185, A:A.265

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Aoyagi-Scharber, M. et al., Structural basis for the inhibition of poly(ADP-ribose) polymerases 1 and 2 by BMN 673, a potent inhibitor derived from dihydropyridophthalazinone. Acta Crystallogr.,Sect.F (2014)

Release Date

2014-09-24

Peptides

Poly [ADP-ribose] polymerase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Poly [ADP-ribose] polymerase 2

Related Entries With Identical Sequence