SMTL ID : 3klt.2 (2 other biounits)

Crystal structure of a vimentin fragment

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

1 x P33: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL(Non-covalent)

P33.1: 5 residues within 4Å: Chain A: Y.14, A.18, N.21, E.24, A.25 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.21, A:E.24, A:E.24

2 x SM: SAMARIUM (III) ION(Non-functional Binders)

SM.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) SM.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x P6G: HEXAETHYLENE GLYCOL(Non-functional Binders)

P6G.3: 4 residues within 4Å: Chain B: Y.14, V.17, A.18, N.21 No protein-ligand interaction detected (PLIP)

2 x CA: CALCIUM ION(Non-functional Binders)

CA.5: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.6: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nicolet, S. et al., Atomic structure of vimentin coil 2. J.Struct.Biol. (2010)

Release Date

2010-05-26

Peptides

Vimentin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Vimentin

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