SMTL ID : 3kvw.1

Crystal Structure of dual-specificity tyrosine phosphorylation regulated kinase 2 (DYRK2) in complex with an indirubin ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.28 Å

Oligo State

monomer

Ligands

1 x IRB: (2Z,3E)-7'-bromo-3-(hydroxyimino)-2'-oxo-1,1',2',3-tetrahydro-2,3'-biindole-5-carboxylic acid(Non-covalent)

IRB.1: 13 residues within 4Å: Chain A: I.105, V.113, A.126, K.128, I.162, F.178, L.180, L.181, S.182, M.183, L.232, I.244, D.245 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.105, A:I.105, A:I.162, A:F.178, A:F.178, A:L.180, A:I.244 Hydrogen bonds: A:L.181, A:L.181, A:D.245 Water bridges: A:F.246 Salt bridges: A:K.128

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: S.8, Y.117, H.122 Ligand excluded by PLIP CL.3: 2 residues within 4Å: Chain A: S.8, H.124 Ligand excluded by PLIP CL.4: 3 residues within 4Å: Chain A: P.297, R.371, A.376 Ligand excluded by PLIP CL.5: 1 residues within 4Å: Chain A: R.361 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Filippakopoulos, P. et al., Crystal Structure of dual-specificity tyrosine phosphorylation regulated kinase 2 (DYRK2) in complex with an indirubin ligand. To be Published

Release Date

2010-01-05

Peptides

Dual specificity tyrosine-phosphorylation-regulated kinase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dual specificity tyrosine-phosphorylation-regulated kinase 2

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