- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 2 x URA: URACIL(Non-covalent)
URA.3: 11 residues within 4Å:- Chain A: T.140, S.141, G.142, F.212, Q.216, R.218, I.246, E.247, M.248, L.272
- Ligands: R2B.4
8 PLIP interactions:8 interactions with chain A- Hydrophobic interactions: A:F.212
- Hydrogen bonds: A:T.140, A:G.142, A:Q.216, A:Q.216, A:R.218, A:R.218
- Water bridges: A:T.140
URA.7: 12 residues within 4Å:- Chain B: T.140, S.141, G.142, F.212, Q.216, R.218, I.246, E.247, M.248, L.272, R.274
- Ligands: R2B.8
8 PLIP interactions:8 interactions with chain B- Hydrophobic interactions: B:F.212
- Hydrogen bonds: B:T.140, B:T.140, B:G.142, B:Q.216, B:Q.216, B:R.218, B:R.218
- 2 x R2B: 1,4-anhydro-D-erythro-pent-1-enitol(Non-covalent)
R2B.4: 10 residues within 4Å:- Chain A: M.109, R.137, T.140, F.212, E.247, M.248, E.249
- Chain B: H.35
- Ligands: SO4.2, URA.3
5 PLIP interactions:2 interactions with chain A, 3 interactions with chain B- Hydrogen bonds: A:T.140, A:M.248, B:H.35
- Water bridges: B:R.93, B:R.93
R2B.8: 10 residues within 4Å:- Chain A: H.35
- Chain B: M.109, R.137, T.140, F.212, E.247, M.248, E.249
- Ligands: SO4.6, URA.7
6 PLIP interactions:3 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:T.140, B:E.247, B:M.248, A:H.35
- Water bridges: A:R.93, A:R.93
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Paul, D. et al., Glycal formation in crystals of uridine phosphorylase. Biochemistry (2010)
- Release Date
- 2010-04-28
- Peptides
- Uridine Phosphorylase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 2 x URA: URACIL(Non-covalent)
- 2 x R2B: 1,4-anhydro-D-erythro-pent-1-enitol(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Paul, D. et al., Glycal formation in crystals of uridine phosphorylase. Biochemistry (2010)
- Release Date
- 2010-04-28
- Peptides
- Uridine Phosphorylase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B