SMTL ID : 3kw9.1

X-ray structure of Cathepsin K covalently bound to a triazine ligand

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x ORG: 4-(cyclohexylamino)-6-piperazin-1-yl-1,3,5-triazine-2-carbonitrile(Covalent)

ORG.1: 14 residues within 4Å: Chain A: Q.19, G.23, S.24, C.25, G.64, G.65, G.66, Y.67, A.134, L.160, N.161, H.162, L.209 Ligands: TFA.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Y.67, A:A.134, A:L.209 Hydrogen bonds: A:Q.19, A:Q.19, A:C.25, A:G.66, A:H.162

1 x TFA: trifluoroacetic acid(Non-covalent)

TFA.2: 5 residues within 4Å: Chain A: Q.19, G.23, H.162, W.184 Ligands: ORG.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rankovic, Z. et al., Design and optimization of a series of novel 2-cyano-pyrimidines as cathepsin K inhibitors. Bioorg.Med.Chem.Lett. (2010)

Release Date

2010-03-02

Peptides

Cathepsin K: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cathepsin K

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