SMTL ID : 3kxa.2 (1 other biounit)

Crystal Structure of NGO0477 from Neisseria gonorrhoeae

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

2 x ASN: ASPARAGINE(Non-covalent)

ASN.1: 7 residues within 4Å: Chain A: K.15, C.16, L.17, K.24, C.25, V.26, K.27 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.17 Hydrogen bonds: A:K.15, A:C.25 ASN.19: 5 residues within 4Å: Chain B: K.15, L.17, K.24, V.26, K.27 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Ligand interactions Hydrogen bonds: B:L.17, B:V.26, N.19, N.19, N.19

11 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.2: 10 residues within 4Å: Ligands: UNX.3, UNX.4, UNX.5, UNX.6, UNX.7, UNX.8, UNX.9, UNX.10, UNX.11, UNX.12 No protein-ligand interaction detected (PLIP) UNX.3: 4 residues within 4Å: Ligands: UNX.2, UNX.4, UNX.5, UNX.6 No protein-ligand interaction detected (PLIP) UNX.4: 6 residues within 4Å: Ligands: UNX.2, UNX.3, UNX.5, UNX.6, UNX.7, UNX.10 No protein-ligand interaction detected (PLIP) UNX.5: 7 residues within 4Å: Chain B: Q.106 Ligands: UNX.2, UNX.3, UNX.4, UNX.6, UNX.7, UNX.8 No protein-ligand interaction detected (PLIP) UNX.6: 9 residues within 4Å: Chain B: Q.106 Ligands: UNX.2, UNX.3, UNX.4, UNX.5, UNX.7, UNX.8, UNX.9, UNX.10 No protein-ligand interaction detected (PLIP) UNX.7: 9 residues within 4Å: Chain A: I.23 Chain B: Q.106 Ligands: UNX.2, UNX.4, UNX.5, UNX.6, UNX.8, UNX.9, UNX.10 No protein-ligand interaction detected (PLIP) UNX.8: 9 residues within 4Å: Chain A: I.23 Chain B: Q.106 Ligands: UNX.2, UNX.5, UNX.6, UNX.7, UNX.9, UNX.10, UNX.11 No protein-ligand interaction detected (PLIP) UNX.9: 8 residues within 4Å: Chain B: Q.106 Ligands: UNX.2, UNX.6, UNX.7, UNX.8, UNX.10, UNX.11, UNX.12 No protein-ligand interaction detected (PLIP) UNX.10: 8 residues within 4Å: Ligands: UNX.2, UNX.4, UNX.6, UNX.7, UNX.8, UNX.9, UNX.11, UNX.12 No protein-ligand interaction detected (PLIP) UNX.11: 5 residues within 4Å: Ligands: UNX.2, UNX.8, UNX.9, UNX.10, UNX.12 No protein-ligand interaction detected (PLIP) UNX.12: 4 residues within 4Å: Ligands: UNX.2, UNX.9, UNX.10, UNX.11 No protein-ligand interaction detected (PLIP)

6 x CL: CHLORIDE ION(Non-functional Binders)

CL.13: 4 residues within 4Å: Chain A: M.78 Chain B: T.34, P.35, A.36 Ligand excluded by PLIP CL.14: 3 residues within 4Å: Chain A: P.124, L.125, R.128 Ligand excluded by PLIP CL.15: 2 residues within 4Å: Chain B: M.78, T.83 Ligand excluded by PLIP CL.16: 1 residues within 4Å: Chain A: K.50 Ligand excluded by PLIP CL.17: 3 residues within 4Å: Chain A: R.100, S.104, K.105 Ligand excluded by PLIP CL.18: 3 residues within 4Å: Chain A: K.105, Q.106, S.107 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ren, J. et al., The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals a novel protein fold incorporating a helix-turn-helix motif. Proteins (2010)

Release Date

2010-01-19

Peptides

Putative uncharacterized protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Putative uncharacterized protein

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