SMTL ID : 3kz8.1

Diversity in DNA recognition by p53 revealed by crystal structures with Hoogsteen base pairs (p53-DNA complex 3)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.91 Å

Oligo State

homo-tetramer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.83, H.86, C.145, C.149 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.83, A:H.86, A:C.145, A:C.149 ZN.3: 4 residues within 4Å: Chain B: C.83, H.86, C.145, C.149 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.83, B:H.86, B:C.145, B:C.149 ZN.5: 4 residues within 4Å: Chain D: C.83, H.86, C.145, C.149 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.83, D:H.86, D:C.145, D:C.149 ZN.7: 4 residues within 4Å: Chain E: C.83, H.86, C.145, C.149 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:C.83, E:H.86, E:C.145, E:C.149

4 x IOD: IODIDE ION(Non-functional Binders)

IOD.2: 1 residues within 4Å: Chain A: M.67 Ligand excluded by PLIP IOD.4: 1 residues within 4Å: Chain B: M.67 Ligand excluded by PLIP IOD.6: 1 residues within 4Å: Chain D: M.67 Ligand excluded by PLIP IOD.8: 1 residues within 4Å: Chain E: M.67 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kitayner, M. et al., Diversity in DNA recognition by p53 revealed by crystal structures with Hoogsteen base pairs. Nat.Struct.Mol.Biol. (2010)

Release Date

2010-03-31

Peptides

Cellular tumor antigen p53: ABDE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

D
A

E
B

Cellular tumor antigen p53

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