SMTL ID : 3kzv.1

The crystal structure of a cytoplasmic protein with unknown function from Saccharomyces cerevisiae

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-tetramer

Ligands

12 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: G.9, V.10, S.11, R.12, A.35, R.36, S.37 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:S.11, A:S.11, A:R.12, A:R.36, A:S.37 Water bridges: A:G.9, A:R.12, A:R.36 GOL.2: 5 residues within 4Å: Chain A: K.126, E.167, E.168, R.169, Q.170 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.126, A:K.126, A:R.169, A:Q.170 Water bridges: A:Q.170 GOL.3: 4 residues within 4Å: Chain A: T.60, E.61, D.62, S.63 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.62, A:D.62, A:S.63 GOL.4: 7 residues within 4Å: Chain B: G.9, V.10, S.11, R.12, A.35, R.36, S.37 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:S.11, B:S.11, B:R.12, B:R.36, B:S.37 Water bridges: B:G.9, B:R.12, B:R.36 GOL.5: 5 residues within 4Å: Chain B: K.126, E.167, E.168, R.169, Q.170 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:K.126, B:K.126, B:R.169, B:Q.170 Water bridges: B:E.168, B:E.168 GOL.6: 4 residues within 4Å: Chain B: T.60, E.61, D.62, S.63 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:D.62, B:D.62, B:S.63 GOL.7: 7 residues within 4Å: Chain C: G.9, V.10, S.11, R.12, A.35, R.36, S.37 8 PLIP interactions: 8 interactions with chain C Hydrogen bonds: C:S.11, C:S.11, C:R.12, C:R.36, C:S.37 Water bridges: C:G.9, C:R.12, C:R.36 GOL.8: 5 residues within 4Å: Chain C: K.126, E.167, E.168, R.169, Q.170 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:K.126, C:K.126, C:R.169, C:Q.170 Water bridges: C:Q.170 GOL.9: 4 residues within 4Å: Chain C: T.60, E.61, D.62, S.63 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:D.62, C:D.62, C:S.63 GOL.10: 7 residues within 4Å: Chain D: G.9, V.10, S.11, R.12, A.35, R.36, S.37 8 PLIP interactions: 8 interactions with chain D Hydrogen bonds: D:S.11, D:S.11, D:R.12, D:R.36, D:S.37 Water bridges: D:G.9, D:R.12, D:R.36 GOL.11: 5 residues within 4Å: Chain D: K.126, E.167, E.168, R.169, Q.170 6 PLIP interactions: 6 interactions with chain D Hydrogen bonds: D:K.126, D:K.126, D:R.169, D:Q.170 Water bridges: D:E.168, D:E.168 GOL.12: 4 residues within 4Å: Chain D: T.60, E.61, D.62, S.63 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:D.62, D:D.62, D:S.63

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, R. et al., The crystal structure of a cytoplasmic protein with unknown function from Saccharomyces cerevisiae. To be Published

Release Date

2010-03-02

Peptides

Uncharacterized oxidoreductase YIR035C: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

Uncharacterized oxidoreductase YIR035C

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