SMTL ID : 6uhx.1

Crystal structure of YIR035C short chain dehydrogenases/reductase from Saccharomyces cerevisiae

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

homo-dimer

Ligands

2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Covalent)

NAP.1: 27 residues within 4Å: Chain A: G.9, S.11, R.12, G.13, I.14, A.35, R.36, S.37, G.57, D.58, I.59, N.85, A.86, G.87, I.109, V.135, S.136, S.137, Y.150, K.154, P.178, G.179, I.180, V.181, T.183, M.185, Q.186 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:P.178 Hydrogen bonds: A:S.11, A:S.11, A:S.11, A:R.12, A:R.12, A:R.36, A:S.37, A:I.59, A:A.86, A:G.87, A:K.154, A:V.181, A:V.181, A:T.183, A:M.185, A:Q.186 Salt bridges: A:R.12, A:R.12, A:R.36 pi-Cation interactions: A:R.36 NAP.2: 29 residues within 4Å: Chain B: G.9, V.10, S.11, R.12, G.13, I.14, A.35, R.36, S.37, G.57, D.58, I.59, N.85, A.86, G.87, I.109, V.135, S.136, S.137, Y.150, K.154, P.178, G.179, I.180, V.181, T.183, D.184, M.185, Q.186 25 PLIP interactions: 25 interactions with chain B Hydrophobic interactions: B:P.178 Hydrogen bonds: B:S.11, B:S.11, B:R.12, B:R.12, B:I.14, B:R.36, B:R.36, B:S.37, B:I.59, B:A.86, B:G.87, B:Y.150, B:K.154, B:V.181, B:V.181, B:D.184, B:M.185, B:Q.186 Water bridges: B:R.12, B:R.12 Salt bridges: B:R.12, B:R.12, B:R.36 pi-Cation interactions: B:R.36

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, C., Crystal structure of YIR035C short chain dehydrogenases/reductase from Saccharomyces cerevisiae. To Be Published

Release Date

2020-08-05

Peptides

Uncharacterized oxidoreductase YIR035C: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Uncharacterized oxidoreductase YIR035C

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