SMTL ID : 3l5s.1

Crystal structure of macrophage migration inhibitory factor (MIF) with imidazopyrimidinylphenyl inhibitor at 1.86A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.86 Å

Oligo State

homo-trimer

Ligands

1 x 88X: 5-ethyl-2-(phenylcarbonyl)imidazo[1,2-a]pyrimidin-7(1H)-one(Non-covalent)

88X.1: 7 residues within 4Å: Chain A: P.1, K.32, Y.36, I.64, W.108, F.113 Chain C: Y.95 11 PLIP interactions: 9 interactions with chain A, 2 interactions with chain C Hydrophobic interactions: A:I.64, A:I.64, A:I.64, A:W.108, A:F.113, A:F.113 Hydrogen bonds: A:P.1, C:Y.95, C:Y.95 pi-Stacking: A:Y.36, A:Y.36

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 1 residues within 4Å: Chain B: H.117 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:H.117 SO4.3: 2 residues within 4Å: Chain C: E.116, H.117 2 PLIP interactions: 2 interactions with chain C Water bridges: C:H.117 Salt bridges: C:H.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McLean, L.R. et al., Fragment screening of inhibitors for MIF tautomerase reveals a cryptic surface binding site. Bioorg.Med.Chem.Lett. (2010)

Release Date

2010-03-09

Peptides

Macrophage migration inhibitory factor: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Macrophage migration inhibitory factor

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