SMTL ID : 3l7i.3 (2 other biounits)

Structure of the Wall Teichoic Acid Polymerase TagF

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: K.327, R.333 Chain B: R.320 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Salt bridges: A:K.327, A:R.333, B:R.320 Hydrogen bonds: B:R.324 SO4.2: 5 residues within 4Å: Chain A: K.449, T.546, Y.623, S.624, S.625 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.625 SO4.10: 4 residues within 4Å: Chain A: R.320 Chain B: K.327, R.333 Ligands: EDO.4 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:R.324 Salt bridges: A:R.320, B:K.327, B:R.333 SO4.11: 5 residues within 4Å: Chain B: K.449, T.546, Y.623, S.624, S.625 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.624, B:S.625

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 5 residues within 4Å: Chain A: A.425, R.426, W.443, Y.468, F.472 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.426, A:Y.468, A:Y.468 EDO.4: 4 residues within 4Å: Chain A: R.324, K.327 Ligands: SO4.10, EDO.12 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:R.324, B:K.327, B:K.327 EDO.12: 4 residues within 4Å: Chain A: K.327 Chain B: R.324, K.327 Ligands: EDO.4 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:R.324, B:K.327, A:K.327 EDO.13: 3 residues within 4Å: Chain B: A.425, R.426, W.443 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.426, B:R.426

8 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 3 residues within 4Å: Chain A: K.351, P.352, K.353 Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain A: N.391, P.392, D.393 Ligand excluded by PLIP CL.7: 3 residues within 4Å: Chain A: R.324, N.328, N.335 Ligand excluded by PLIP CL.8: 3 residues within 4Å: Chain A: L.431, K.433, R.478 Ligand excluded by PLIP CL.9: 1 residues within 4Å: Chain A: R.697 Ligand excluded by PLIP CL.14: 3 residues within 4Å: Chain B: K.351, P.352, K.353 Ligand excluded by PLIP CL.15: 3 residues within 4Å: Chain B: N.391, P.392, D.393 Ligand excluded by PLIP CL.16: 1 residues within 4Å: Chain B: R.582 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lovering, A.L. et al., Structure of the bacterial teichoic acid polymerase TagF provides insights into membrane association and catalysis. Nat.Struct.Mol.Biol. (2010)

Release Date

2010-04-28

Peptides

Teichoic acid biosynthesis protein F: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Teichoic acid biosynthesis protein F

Related Entries With Identical Sequence