SMTL ID : 3lc5.1

Selective Benzothiophine Inhibitors of Factor IXa

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.62 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: E.55, N.57, E.60, E.62, E.65 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:N.57, A:E.60, A:E.62, A:E.65, H2O.1

1 x IZX: 1-{4-[(R)-phenyl(3-phenyl-1,2,4-oxadiazol-5-yl)methoxy]-1-benzothiophen-2-yl}methanediamine(Non-covalent)

IZX.2: 15 residues within 4Å: Chain A: R.132, H.135, F.162, D.179, S.180, C.181, Q.182, S.185, S.204, W.205, G.206, E.207, E.208, C.209, G.216 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:Q.182, A:W.205 Hydrogen bonds: A:D.179, A:S.180, A:E.208, A:E.208 pi-Stacking: A:F.162

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, S. et al., Structure Based Drug Design: Development of Potent and Selective Factor IXa (FIXa) Inhibitors. J.Med.Chem. (2010)

Release Date

2010-02-23

Peptides

Coagulation factor IX: A
Coagulation factor IX: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Coagulation factor IX

Coagulation factor IX

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