SMTL ID : 3lmj.1

Structure of human anti HIV 21c Fab

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-oligomer

Ligands

2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 4 residues within 4Å: Chain A: Q.117, G.118, P.161 Chain B: G.42 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:Q.117 MPD.2: 6 residues within 4Å: Chain A: G.42 Chain B: D.86, Y.88, G.104, G.105, T.106 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.42

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Diskin, R. et al., Structure of a clade C HIV-1 gp120 bound to CD4 and CD4-induced antibody reveals anti-CD4 polyreactivity. Nat.Struct.Mol.Biol. (2010)

Release Date

2010-04-07

Peptides

Heavy chain of anti HIV Fab from human 21c antibody: A
Light chain of anti HIV Fab from human 21c antibody: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

Heavy chain of anti HIV Fab from human 21c antibody

Light chain of anti HIV Fab from human 21c antibody

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