SMTL ID : 3lnk.2 (1 other biounit)

Structure of BACE bound to SCH743813

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x 74A: N'-{(1S,2S)-1-(3,5-difluorobenzyl)-2-hydroxy-2-[(2R)-4-(phenylcarbonyl)piperazin-2-yl]ethyl}-5-methyl-N,N-dipropylbenzene-1,3-dicarboxamide(Non-covalent)

74A.1: 22 residues within 4Å: Chain A: G.20, Q.21, L.39, D.41, G.43, S.44, Y.80, T.81, G.83, K.116, F.117, I.119, W.124, I.127, Y.207, I.235, D.237, G.239, T.240, T.241, R.244, T.338 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.39, A:T.81, A:I.127, A:T.338 Hydrogen bonds: A:G.43, A:T.81, A:T.81, A:D.237, A:G.239, A:T.241 Water bridges: A:Q.82, A:D.237, A:N.242 pi-Stacking: A:Y.80

1 x TLA: L(+)-TARTARIC ACID(Non-covalent)

TLA.2: 5 residues within 4Å: Chain A: R.16, N.37, H.58, R.59, N.123 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:N.37, A:H.58, A:N.123 Water bridges: A:N.37, A:R.59, A:R.59, A:R.59 Salt bridges: A:R.16, A:H.58, A:R.59, A:R.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cumming, J. et al., Piperazine sulfonamide BACE1 inhibitors: design, synthesis, and in vivo characterization. Bioorg.Med.Chem.Lett. (2010)

Release Date

2010-04-14

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-secretase 1

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