SMTL ID : 3lqk.2 (2 other biounits)

Crystal structure of dipicolinate synthase subunit B from Bacillus halodurans C

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-trimer

Ligands

6 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 6 residues within 4Å: Chain A: T.15, G.16, T.43, T.96, N.98, S.99 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.16, A:T.96, A:N.98, A:S.99 PO4.2: 5 residues within 4Å: Chain A: E.79, P.83, R.121 Chain C: N.133, K.165 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain C Hydrogen bonds: A:E.79, C:N.133 Salt bridges: A:R.121, C:K.165 Water bridges: C:N.133 PO4.3: 6 residues within 4Å: Chain B: T.15, G.16, T.43, T.96, N.98, S.99 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.16, B:T.96, B:N.98, B:S.99 PO4.4: 5 residues within 4Å: Chain A: N.133, K.165 Chain B: E.79, P.83, R.121 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:E.79, A:N.133 Salt bridges: B:R.121, A:K.165 Water bridges: A:N.133 PO4.5: 6 residues within 4Å: Chain C: T.15, G.16, T.43, T.96, N.98, S.99 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:G.16, C:T.96, C:N.98, C:S.99 PO4.6: 5 residues within 4Å: Chain B: N.133, K.165 Chain C: E.79, P.83, R.121 5 PLIP interactions: 2 interactions with chain C, 3 interactions with chain B Hydrogen bonds: C:E.79, B:N.133 Salt bridges: C:R.121, B:K.165 Water bridges: B:N.133

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nocek, B. et al., Crystal structure of dipicolinate synthase subunit B from Bacillus halodurans C. To be Published

Release Date

2010-03-23

Peptides

Dipicolinate synthase subunit B: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Dipicolinate synthase subunit B

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