SMTL ID : 3m33.4 (3 other biounits)

The crystal structure of a functionally unknown protein from Deinococcus radiodurans R1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.19 Å

Oligo State

homo-dimer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: R.22, H.59, P.61 Ligand excluded by PLIP CL.8: 3 residues within 4Å: Chain B: R.22, H.59, P.61 Ligand excluded by PLIP

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: K.101, R.153 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.153, A:R.153 Salt bridges: A:K.101, A:R.153 SO4.3: 4 residues within 4Å: Chain A: R.144, L.145, N.146 Ligands: GOL.6 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:L.145, A:N.146, A:N.146 Salt bridges: A:R.144 SO4.4: 3 residues within 4Å: Chain A: P.205, Y.206, R.207 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.207 SO4.9: 2 residues within 4Å: Chain B: K.101, R.153 4 PLIP interactions: 4 interactions with chain B Water bridges: B:R.153, B:R.153 Salt bridges: B:K.101, B:R.153 SO4.10: 4 residues within 4Å: Chain B: R.144, L.145, N.146 Ligands: GOL.13 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:L.145, B:N.146, B:N.146 Salt bridges: B:R.144 SO4.11: 3 residues within 4Å: Chain B: P.205, Y.206, R.207 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.207

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 6 residues within 4Å: Chain A: R.22, P.61, D.62, R.65, R.118, R.119 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.22, A:R.22, A:R.65, A:R.119 GOL.6: 9 residues within 4Å: Chain A: P.143, R.144, L.145, M.186, R.207, E.208, E.209, R.210 Ligands: SO4.3 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:L.145, A:E.208, A:E.209, A:E.209, A:R.210 GOL.7: 5 residues within 4Å: Chain A: R.44, L.45, H.137 Chain B: G.31, P.32 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.44, A:R.44 Water bridges: A:L.45 GOL.12: 6 residues within 4Å: Chain B: R.22, P.61, D.62, R.65, R.118, R.119 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.22, B:R.22, B:R.65, B:R.119 GOL.13: 9 residues within 4Å: Chain B: P.143, R.144, L.145, M.186, R.207, E.208, E.209, R.210 Ligands: SO4.10 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:L.145, B:E.208, B:E.209, B:E.209, B:R.210 GOL.14: 5 residues within 4Å: Chain A: G.31, P.32 Chain B: R.44, L.45, H.137 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.44, B:R.44 Water bridges: B:L.45

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tan, K. et al., The crystal structure of a functionally unknown protein from Deinococcus radiodurans R1. To be Published

Release Date

2010-03-31

Peptides

Uncharacterized protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

Uncharacterized protein

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