SMTL ID : 3mbe.1 (1 other biounit)

TCR 21.30 in complex with MHC class II I-Ag7HEL(11-27)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.89 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain E: W.159, E.164, Q.208, T.227, N.229 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 4 residues within 4Å: Chain A: N.122, E.170, H.171, W.172 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yoshida, K. et al., The diabetogenic mouse MHC class II molecule I-Ag7 is endowed with a switch that modulates TCR affinity. J.Clin.Invest. (2010)

Release Date

2010-05-12

Peptides

MHC CLASS II H2-IAg7 ALPHA CHAIN: A
MHC CLASS II H2-IAg7 BETA CHAIN: B
PEPTIDE HEL 11-27: C
TCR 21.3 alpha chain: D
TCR 21.3 beta chain: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
P

D
C

E
D

MHC CLASS II H2-IAg7 ALPHA CHAIN

MHC CLASS II H2-IAg7 BETA CHAIN

PEPTIDE HEL 11-27

TCR 21.3 alpha chain

TCR 21.3 beta chain

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