SMTL ID : 3me6.1 (3 other biounits)

Crystal structure of cytochrome 2B4 in complex with the anti-platelet drug clopidogrel

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 23 residues within 4Å: Chain A: R.79, I.95, W.102, R.106, L.276, A.279, G.280, T.283, T.284, Q.338, I.344, V.348, H.350, L.373, P.409, F.410, S.411, R.415, C.417, G.419, I.422, A.423 Ligands: CGE.2 16 PLIP interactions: 16 interactions with chain A, Hydrophobic interactions: A:I.95, A:I.344, A:V.348, A:L.373, A:F.410, A:F.410, A:I.422, A:A.423 Hydrogen bonds: A:V.348, A:S.411 Salt bridges: A:R.79, A:R.79, A:R.106, A:H.350, A:R.415 Metal complexes: A:C.417

1 x CGE: Clopidogrel(Non-covalent)

CGE.2: 11 residues within 4Å: Chain A: V.85, F.89, F.187, I.190, F.278, A.279, T.283, I.344, V.348, V.458 Ligands: HEM.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.190, A:F.278, A:A.279 pi-Stacking: A:F.278

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gay, S.C. et al., Structures of cytochrome P450 2B4 complexed with the antiplatelet drugs ticlopidine and clopidogrel. Biochemistry (2010)

Release Date

2010-09-15

Peptides

Cytochrome P450 2B4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytochrome P450 2B4

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