- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.85 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 2 x EJZ: 5-nitro-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid(Non-covalent)
EJZ.2: 13 residues within 4Å:- Chain A: K.78, S.79, N.102, M.104, G.105, L.106, P.107, N.162, S.164, C.165, N.229, S.230
- Ligands: FMN.1
12 PLIP interactions:12 interactions with chain A- Hydrogen bonds: A:N.102, A:N.102, A:N.102, A:M.104, A:G.105, A:L.106, A:N.162, A:N.229, A:N.229, A:S.230
- Water bridges: A:G.254
- Salt bridges: A:K.78
EJZ.9: 13 residues within 4Å:- Chain B: K.78, S.79, N.102, M.104, G.105, L.106, P.107, N.162, C.165, P.166, N.229, S.230
- Ligands: FMN.8
11 PLIP interactions:11 interactions with chain B- Hydrogen bonds: B:N.102, B:N.102, B:G.105, B:L.106, B:N.162, B:N.229, B:N.229, B:S.230
- Water bridges: B:S.103, B:G.254
- Salt bridges: B:K.78
- 5 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 5 residues within 4Å:- Chain A: V.236, I.237
- Chain B: L.261, L.265, L.294
4 PLIP interactions:1 interactions with chain B, 3 interactions with chain A- Water bridges: B:D.291, A:Y.259, A:Y.259
- Hydrogen bonds: A:I.237
GOL.4: 4 residues within 4Å:- Chain A: E.240, T.241, E.242
- Chain B: R.344
7 PLIP interactions:6 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:R.344, B:R.344, A:E.242
- Water bridges: B:K.331, B:Y.333, B:Y.333, B:R.344
GOL.5: 6 residues within 4Å:- Chain A: D.205, F.206, A.207
- Chain B: P.166, N.233, K.249
5 PLIP interactions:3 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:P.166, B:N.233, B:K.249, A:F.206, A:A.207
GOL.6: 6 residues within 4Å:- Chain A: Q.173, N.233, K.249
- Chain B: D.205, F.206, A.207
6 PLIP interactions:3 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:D.205, B:F.206, B:A.207, A:N.233, A:N.233, A:K.249
GOL.10: 5 residues within 4Å:- Chain A: L.261, L.265, L.294
- Chain B: V.236, I.237
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain B- Water bridges: A:D.291
- Hydrogen bonds: B:I.237
- 1 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cheleski, J. et al., Novel insights for dihydroorotate dehydrogenase class 1A inhibitors discovery. Eur.J.Med.Chem. (2010)
- Release Date
- 2011-02-23
- Peptides
- Dihydroorotate dehydrogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.85 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 2 x EJZ: 5-nitro-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid(Non-covalent)
- 5 x GOL: GLYCEROL(Non-functional Binders)
- 1 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cheleski, J. et al., Novel insights for dihydroorotate dehydrogenase class 1A inhibitors discovery. Eur.J.Med.Chem. (2010)
- Release Date
- 2011-02-23
- Peptides
- Dihydroorotate dehydrogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B