SMTL ID : 3mp6.1

Complex Structure of Sgf29 and dimethylated H3K4

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.48 Å

Oligo State

monomer

Ligands

1 x ALA- ARG- THR- MLY: H3K4me2 peptide(Non-covalent)

ALA-ARG-THR-MLY.1: 10 residues within 4Å: Chain A: I.408, D.426, E.428, Y.468, T.471, T.472, T.473, Y.475, F.492, D.493 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.408, A:Y.468, A:T.471, A:Y.475 Hydrogen bonds: A:D.426, A:T.472, A:T.472, A:Y.475 Water bridges: A:E.428, A:E.428 Salt bridges: A:E.428

1 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.2: 16 residues within 4Å: Chain A: N.13, D.15, K.16, W.63, A.64, D.66, R.67, E.112, E.154, P.155, Y.156, F.157, W.231, M.331, W.341, R.345 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:W.63, A:R.67, A:R.67, A:E.154, A:Y.156, A:R.345

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bian, C. et al., Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation. Embo J. (2011)

Release Date

2011-05-04

Peptides

Maltose-binding periplasmic protein,LINKER,SAGA-associated factor 29: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Maltose-binding periplasmic protein,LINKER,SAGA-associated factor 29

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