- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.43 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x ACO: ACETYL COENZYME *A(Non-covalent)
- 2 x U5P: URIDINE-5'-MONOPHOSPHATE(Non-covalent)
U5P.2: 9 residues within 4Å:- Chain A: W.25, H.26, S.41, G.43, Q.44, N.62
- Chain C: H.29, F.47, Y.67
9 PLIP interactions:7 interactions with chain A, 2 interactions with chain C- Hydrogen bonds: A:S.41, A:S.41, A:Q.44, A:Q.61, A:N.62
- Water bridges: A:H.26, C:N.50, C:D.68
- pi-Stacking: A:W.25
U5P.8: 10 residues within 4Å:- Chain A: H.29, F.47, Y.67
- Chain B: W.25, H.26, S.41, G.43, Q.44, Q.61, N.62
12 PLIP interactions:8 interactions with chain B, 4 interactions with chain A- Hydrogen bonds: B:S.41, B:S.41, B:Q.44, B:Q.61, B:N.62
- Water bridges: B:R.23, B:H.26, A:D.13, A:H.29, A:N.50, A:N.50
- pi-Stacking: B:W.25
- 1 x NA: SODIUM ION(Non-functional Binders)
- 2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 1 x PO4: PHOSPHATE ION(Non-functional Binders)
- 2 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)
UDP.10: 4 residues within 4Å:- Chain C: R.23, W.25, S.41
- Ligands: UDP.11
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:R.23, C:S.41, C:S.41
UDP.11: 13 residues within 4Å:- Chain B: H.29, F.47, Y.67, K.97
- Chain C: R.23, W.25, H.26, S.41, G.43, Q.44, Q.61, N.62
- Ligands: UDP.10
11 PLIP interactions:7 interactions with chain C, 4 interactions with chain B- Hydrogen bonds: C:S.41, C:Q.44, C:Q.61, C:N.62
- Water bridges: C:H.26, B:N.50, B:N.50
- Salt bridges: C:R.23, B:K.97, B:K.97
- pi-Stacking: C:W.25
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Thoden, J.B. et al., Molecular structure of WlbB, a bacterial N-acetyltransferase involved in the biosynthesis of 2,3-diacetamido-2,3-dideoxy-D-mannuronic acid . Biochemistry (2010)
- Release Date
- 2010-05-12
- Peptides
- Lipopolysaccharides biosynthesis acetyltransferase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
DB
EC
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.43 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x ACO: ACETYL COENZYME *A(Non-covalent)
- 2 x U5P: URIDINE-5'-MONOPHOSPHATE(Non-covalent)
- 1 x NA: SODIUM ION(Non-functional Binders)
- 2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 1 x PO4: PHOSPHATE ION(Non-functional Binders)
- 2 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Thoden, J.B. et al., Molecular structure of WlbB, a bacterial N-acetyltransferase involved in the biosynthesis of 2,3-diacetamido-2,3-dideoxy-D-mannuronic acid . Biochemistry (2010)
- Release Date
- 2010-05-12
- Peptides
- Lipopolysaccharides biosynthesis acetyltransferase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
DB
EC
F